Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC108941.1-201ENST00000502853 530 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC093752.1-206ENST00000511823 336 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP179-201ENST00000517284 121 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 OR8K4P-201ENST00000534608 872 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC063949.1-201ENST00000552900 865 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL132857.1-201ENST00000555180 708 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 MTCYBP23-201ENST00000558717 1102 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL158211.1-201ENST00000566763 763 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC023824.3-201ENST00000569003 562 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC115621.1-201ENST00000604653 858 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC091167.4-201ENST00000605079 184 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC211433.2-201ENST00000608433 387 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 PART1_2.1-201ENST00000612397 250 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL078595.3-201ENST00000623815 1166 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC011944.2-201ENST00000624440 683 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC015726.3-201ENST00000624501 418 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL121594.5-201ENST00000631724 573 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 U6.98-201ENST00000637157 84 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC28BQ9BUN5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC28BQ9BUN5 USP8P1-201ENST00000494673 3183 ntBASIC3.71□□□□□ -1.81
CCDC28BQ9BUN5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 RNA5SP509-201ENST00000364577 119 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 ENSAP1-201ENST00000392855 326 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC136624.1-201ENST00000400791 413 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 MTCO1P56-201ENST00000401674 224 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-55P-201ENST00000411092 107 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 RNU6-954P-201ENST00000411355 107 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC069218.2-201ENST00000411665 344 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CNOT7P1-201ENST00000429006 852 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 MTND2P5-201ENST00000432656 1006 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL035246.1-201ENST00000433554 1255 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL031663.1-201ENST00000437445 219 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC244505.3-201ENST00000454598 187 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC079203.1-201ENST00000487972 404 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC012170.1-201ENST00000495139 359 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL035404.1-201ENST00000497982 568 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC093720.1-201ENST00000505681 714 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 SNX5P1-201ENST00000505757 1041 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC010306.1-201ENST00000523223 1117 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC011602.1-201ENST00000546484 331 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC090312.2-201ENST00000582687 378 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 VN1R88P-201ENST00000596787 292 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AL157392.4-201ENST00000609756 345 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC109454.4-201ENST00000623411 649 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC016717.3-201ENST00000624730 554 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 BX649567.1-201ENST00000642071 1134 ntBASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC28BQ9BUN5 AC092326.2-201ENST00000624772 1561 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms