Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNX18Q96RF0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC090515.3-201ENST00000560431 315 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC136618.2-201ENST00000575091 400 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC083760.1-201ENST00000589621 670 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC104687.2-201ENST00000604442 342 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC126118.1-201ENST00000607744 628 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC006566.1-201ENST00000608943 513 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AL589743.7-201ENST00000612637 233 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC243773.3-201ENST00000613270 256 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC026368.1-201ENST00000614934 690 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX18Q96RF0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNX18Q96RF0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.48□□□□□ -1.69
SNX18Q96RF0 AC107068.1-201ENST00000563286 4218 ntBASIC4.48□□□□□ -1.69
SNX18Q96RF0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AP000756.2-201ENST00000624168 2567 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 OR4A15-201ENST00000314706 1035 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX18Q96RF0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 RNA5SP305-201ENST00000362665 119 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 RNU1-85P-201ENST00000364127 164 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL592291.1-201ENST00000403830 352 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 U3.36-201ENST00000408418 213 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 Y_RNA.604-201ENST00000410574 102 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 RPL17P12-201ENST00000413391 526 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC109780.2-201ENST00000413467 845 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 HMGB1P11-201ENST00000413899 637 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC093162.1-201ENST00000419682 124 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL389915.1-201ENST00000422463 466 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 SDCBPP2-201ENST00000424643 885 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL590762.4-201ENST00000425885 253 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL031736.2-201ENST00000426573 787 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 OR7E125P-201ENST00000443450 846 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MRPL48P1-201ENST00000445390 636 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL691482.1-201ENST00000453255 87 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 RPL35AP28-201ENST00000459730 331 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 RPS7P7-201ENST00000463499 571 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC092757.1-201ENST00000467293 467 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AP000797.1-201ENST00000478870 387 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 RN7SL97P-201ENST00000486780 299 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC026412.2-201ENST00000512270 1075 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MTCYBP41-201ENST00000528913 1123 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AP002453.2-201ENST00000533503 320 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 ZNF519P3-201ENST00000557158 1032 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC136619.2-201ENST00000563361 631 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX18Q96RF0 MIR4700-201ENST00000578311 74 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 MIR4646-201ENST00000580775 63 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 MIR4436B2-201ENST00000581415 91 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 MIR4436B1-201ENST00000583272 91 ntBASIC4.47□□□□□ -1.69
SNX18Q96RF0 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms