Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC012170.1-201ENST00000495139 359 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC005351.1-201ENST00000511152 786 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 SNORA67.7-201ENST00000516664 135 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 PAICSP4-201ENST00000517543 1253 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC012467.1-201ENST00000607740 256 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 AC104307.1-201ENST00000616142 196 ntBASIC3.37□□□□□ -1.87
COL21A1Q96P44 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
COL21A1Q96P44 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL21A1Q96P44 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 NSRP1P1-201ENST00000444067 1693 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC011978.2-201ENST00000569835 2054 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 Y_RNA.333-201ENST00000365274 102 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 SNORD3H-201ENST00000384486 214 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 MTCO3P31-201ENST00000405526 789 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 PRELID3BP11-201ENST00000414230 479 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 XKRYP4-201ENST00000414395 483 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 RPS12P23-201ENST00000419579 400 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC018644.1-201ENST00000429934 551 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC007000.2-201ENST00000442564 487 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 XKRYP5-201ENST00000449659 483 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 PPIAP3-201ENST00000450588 505 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 RPL23AP23-201ENST00000452590 471 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 SNORD108-201ENST00000459332 71 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 TRAV31-201ENST00000502780 342 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 HAUS1P3-201ENST00000523909 662 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 AP001636.2-201ENST00000525517 696 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC233266.2-201ENST00000567067 528 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC090312.2-201ENST00000582687 378 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
COL21A1Q96P44 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL21A1Q96P44 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 RNA5SP51-201ENST00000364750 119 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 MIR124-3-201ENST00000384866 87 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 TATDN1P1-201ENST00000414123 891 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC008280.1-201ENST00000418851 412 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 RPS15AP6-201ENST00000420703 385 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC245054.1-201ENST00000420944 258 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL049610.1-201ENST00000423374 372 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL133547.1-201ENST00000448546 220 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC146507.1-201ENST00000468335 354 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC110792.2-201ENST00000510278 224 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.35□□□□□ -1.87
COL21A1Q96P44 RNU1-95P-201ENST00000516357 160 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 RNU1-128P-201ENST00000516704 160 ntBASIC3.35□□□□□ -1.87
COL21A1Q96P44 RANP9-201ENST00000519957 271 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms