Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC068870.1-201ENST00000563737 2455 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AL161781.1-201ENST00000354277 403 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AL121886.1-201ENST00000358609 435 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RNA5SP326-201ENST00000363209 110 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RN7SKP124-201ENST00000364730 341 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RN7SKP6-201ENST00000364795 319 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RNU6-359P-201ENST00000365466 108 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 MIR143-201ENST00000385300 106 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RNU6-1068P-201ENST00000410958 103 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RPL12P9-201ENST00000412942 488 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC119618.1-201ENST00000434191 222 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AL390119.1-201ENST00000440329 312 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 BNIP3P2-201ENST00000441221 577 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RPS26P56-201ENST00000444468 240 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC140076.1-201ENST00000449897 361 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC005297.2-201ENST00000450430 606 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC011005.3-201ENST00000491624 395 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC093278.1-201ENST00000494700 600 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RN7SKP99-201ENST00000517028 307 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC093027.1-201ENST00000546698 429 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC078814.3-201ENST00000553036 491 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC015720.2-201ENST00000567709 334 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC010928.3-201ENST00000587712 541 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RPL26P30-202ENST00000602923 645 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC025574.2-201ENST00000615621 514 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC132068.1-201ENST00000623805 459 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC092447.10-201ENST00000620607 1652 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 AC114774.1-201ENST00000507410 1770 ntBASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PTCHD1Q96NR3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 Y_RNA.166-201ENST00000363730 102 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RNU6-1227P-201ENST00000383981 107 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RNU6-1158P-201ENST00000391167 107 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC012075.1-201ENST00000436549 580 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC016691.1-201ENST00000441321 413 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC019185.1-201ENST00000442718 389 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 CBWD4P-201ENST00000445695 655 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AL596266.1-201ENST00000448132 400 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AP1S2P1-201ENST00000457344 379 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 APOOP2-201ENST00000461561 539 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC063943.1-201ENST00000465434 453 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC006511.1-201ENST00000470614 315 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AP000893.1-201ENST00000474462 794 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RPL7P39-201ENST00000481157 744 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 ATP5LP5-201ENST00000483050 299 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 NPM1P41-201ENST00000512920 831 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 GAPDHP62-201ENST00000515313 990 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RNA5SP401-201ENST00000515920 127 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RNA5SP362-201ENST00000516048 118 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 SNORA40.12-201ENST00000516329 111 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC107934.1-201ENST00000522215 217 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC136777.2-201ENST00000522979 358 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AC022690.1-201ENST00000526681 550 ntBASIC5.23□□□□□ -1.57
PTCHD1Q96NR3 AP005639.2-201ENST00000527592 928 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms