Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 NPM1P34-201ENST00000428821 893 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 MTND1P20-201ENST00000430341 950 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AL359265.2-201ENST00000434367 631 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 MTCO2P16-201ENST00000436962 677 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC073264.2-201ENST00000448886 166 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 NDUFS5P3-201ENST00000450668 321 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 RPL23AP65-201ENST00000475608 468 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 KLRA1P-201ENST00000503499 986 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AP000790.1-201ENST00000528891 737 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AP001781.1-201ENST00000530977 207 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 ATP5J2P6-201ENST00000565203 266 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 ACTR3BP3-201ENST00000565577 979 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC011260.1-201ENST00000578420 472 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 RN7SL690P-201ENST00000582087 240 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 VN1R92P-201ENST00000598511 928 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC146944.4-201ENST00000602697 718 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC087283.1-201ENST00000604029 1074 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AL359535.1-201ENST00000612100 1087 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AL133243.1-201ENST00000614487 366 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC005086.4-201ENST00000623065 213 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AL356489.2-201ENST00000566968 3528 ntBASIC5.09□□□□□ -1.59
CDK5RAP3Q96JB5 AC139769.1-204ENST00000472297 1931 ntBASIC5.09□□□□□ -1.6
CDK5RAP3Q96JB5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF37BP-203ENST00000452306 1352 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 NXPH1-205ENST00000602349 1953 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 OR4A15-201ENST00000314706 1035 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 Y_RNA.51-201ENST00000362725 102 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 Y_RNA.77-201ENST00000362962 107 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 Y_RNA.201-201ENST00000364052 96 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 RNU6-1279P-201ENST00000383917 103 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 RPS3AP26-201ENST00000398259 784 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 NUP35P2-201ENST00000416748 943 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ARL2BPP10-201ENST00000446487 531 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 MTCO2P7-201ENST00000446518 666 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC012671.1-201ENST00000451912 203 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC010301.1-201ENST00000473936 355 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 IGLV2-34-201ENST00000490007 283 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC108078.3-201ENST00000502633 489 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 DEFB109D-201ENST00000529497 240 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AC069061.3-201ENST00000582254 823 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ELOCP28-201ENST00000590044 317 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 AL031985.2-201ENST00000600955 480 ntBASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CDK5RAP3Q96JB5 ZNF833P-201ENST00000424938 1494 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms