Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 MTCO2P21-201ENST00000419780 677 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 HIGD1AP12-201ENST00000427832 281 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC093716.1-201ENST00000435923 377 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AL591719.1-201ENST00000444669 744 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC104982.1-201ENST00000478775 574 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 MTCYBP35-201ENST00000503630 1137 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC117522.2-201ENST00000510049 657 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC104115.2-201ENST00000523026 687 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC021451.1-201ENST00000523498 1129 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC087894.1-201ENST00000538359 518 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 CKS1BP1-201ENST00000555221 240 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC234772.3-201ENST00000602277 528 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AL606834.2-201ENST00000602954 668 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AL139395.1-201ENST00000603662 160 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 KATNBL1P5-201ENST00000605015 517 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC124312.4-201ENST00000605533 310 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC012557.2-201ENST00000605919 418 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AL355802.4-201ENST00000607635 548 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 AC079395.3-201ENST00000615161 484 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.34□□□□□ -1.72
SNED1Q8TER0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
SNED1Q8TER0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNED1Q8TER0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNED1Q8TER0 DDX6P1-205ENST00000441966 1436 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AL513185.3-201ENST00000433335 1300 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNED1Q8TER0 MFSD8-213ENST00000641134 1327 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 RPL23AP57-201ENST00000332361 466 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 SNORA38.1-201ENST00000364172 131 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 JKAMPP1-201ENST00000413804 919 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 HMGB3P20-201ENST00000417997 600 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 RPF2P1-201ENST00000424137 906 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 MOB1AP2-201ENST00000446060 614 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 HMGB1P21-201ENST00000502313 581 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC109458.1-201ENST00000508858 316 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 RNU6-334P-201ENST00000517072 102 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 MIR4513-201ENST00000581077 86 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 BMS1P7-201ENST00000602440 1052 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 U4.6-201ENST00000621618 127 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC068880.4-201ENST00000623082 495 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AL732618.1-201ENST00000623251 301 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC145207.9-201ENST00000623802 325 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNED1Q8TER0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNED1Q8TER0 DDX18P3-201ENST00000404856 2007 ntBASIC4.33□□□□□ -1.72
SNED1Q8TER0 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC068254.2-201ENST00000623938 3577 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
SNED1Q8TER0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SNED1Q8TER0 AL355578.1-201ENST00000607405 1328 ntBASIC4.32□□□□□ -1.72
SNED1Q8TER0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms