Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 RPS17P11-201ENST00000474297 293 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 HMGB1P6-201ENST00000569046 646 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 AC099489.2-201ENST00000574976 260 ntBASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ALMS1Q8TCU4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 RAB28P3-201ENST00000448325 597 ntBASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 USP9YP5-201ENST00000511770 630 ntBASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.15□□□□□ -2.06
ALMS1Q8TCU4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC016696.1-201ENST00000446949 318 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 RN7SL330P-201ENST00000469709 307 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 uc_338.25-201ENST00000613756 156 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 RNA5SP293-201ENST00000410527 113 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 MYL8P-204ENST00000431574 518 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 FTH1P1-201ENST00000437933 532 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 RN7SL594P-201ENST00000470590 287 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AC021146.1-201ENST00000511202 716 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AL121766.1-201ENST00000547436 487 ntBASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
ALMS1Q8TCU4 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AL353678.1-201ENST00000422735 741 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC003685.2-201ENST00000422795 395 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AL365396.1-201ENST00000430854 671 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 CBX1P4-201ENST00000439415 457 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 RPS3AP50-201ENST00000487064 803 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 SETP12-201ENST00000514068 805 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC010306.1-201ENST00000523223 1117 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AP001636.2-201ENST00000525517 696 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC068647.1-201ENST00000489539 2265 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 EXOC5P1-201ENST00000510543 1969 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 SNORA70B-201ENST00000384210 135 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 RPL31P12-201ENST00000422587 358 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC009812.2-201ENST00000517657 457 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AP000926.4-201ENST00000527351 454 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 MAPK10-362ENST00000641864 4484 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 HMGN2P8-201ENST00000391458 268 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AL035407.1-201ENST00000429211 571 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 OR5AP1P-201ENST00000529730 940 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC007619.2-201ENST00000605743 379 ntBASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ALMS1Q8TCU4 AP002088.1-201ENST00000382740 395 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AL645937.1-202ENST00000421799 937 ntBASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.13□□□□□ -2.07
ALMS1Q8TCU4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms