Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC008526.1-201ENST00000509149 338 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1137P-201ENST00000517073 99 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AL121576.1-201ENST00000556055 276 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 MIR4680-201ENST00000580906 66 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 SNHG22-203ENST00000617833 660 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC027287.1-201ENST00000553115 1453 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 XIAPP3-201ENST00000312918 795 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 MRPS6P2-201ENST00000381143 370 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 Y_RNA.399-201ENST00000383955 105 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1032P-201ENST00000384100 107 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 MIR99A-201ENST00000384906 81 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 CISD1P1-201ENST00000393907 327 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RN7SKP159-201ENST00000410657 292 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RNA5SP115-201ENST00000411160 107 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 PDSS1P1-201ENST00000422953 1114 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 PPIAP32-201ENST00000449940 472 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RPL23AP60-201ENST00000450011 454 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AL162388.1-201ENST00000450912 352 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 SETP20-201ENST00000457046 852 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 TRBV1-201ENST00000476502 284 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL165P-201ENST00000477476 291 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC008638.1-201ENST00000506035 866 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-794P-201ENST00000517261 64 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 COX6CP5-201ENST00000527162 228 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 MIR378C-201ENST00000578683 81 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AL035410.2-201ENST00000604963 864 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC006329.2-201ENST00000611491 394 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 AC008626.2-201ENST00000624425 248 ntBASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.09□□□□□ -1.43
DEPDC4Q8N2C3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
DEPDC4Q8N2C3 Z95114.1-201ENST00000624264 14574 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 Y_RNA.5-201ENST00000362334 102 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-310P-201ENST00000384655 107 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AL391417.1-201ENST00000404100 426 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 RNU4-65P-201ENST00000410473 140 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 RPL23AP33-201ENST00000442301 452 ntBASIC6.08□□□□□ -1.44
DEPDC4Q8N2C3 BX276092.4-201ENST00000452056 248 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms