Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 UBE2NP1-201ENST00000545592 458 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC084757.1-201ENST00000559987 490 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 HMGB2P1-201ENST00000591146 634 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC103881.1-201ENST00000603476 538 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC103792.1-201ENST00000603591 919 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC106791.2-201ENST00000604680 391 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 VIS1.1-201ENST00000610517 203 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL139418.1-201ENST00000613613 177 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 MIR6891-201ENST00000618788 93 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL445567.2-201ENST00000618935 498 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC120349.2-201ENST00000625002 298 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 OR8B1P-202ENST00000641132 1178 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 SAGE2P-201ENST00000420011 2126 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MTND5P28-201ENST00000438005 1594 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AL390862.1-201ENST00000635467 1469 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MIR448-201ENST00000362131 111 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 RNA5SP479-201ENST00000364858 117 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 RNU6-921P-201ENST00000384361 107 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MIR3065-201ENST00000390137 79 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 RPS20P14-201ENST00000412545 360 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 RPS3AP9-201ENST00000417027 792 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AL139095.3-201ENST00000419672 1203 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MTND2P22-201ENST00000444325 1033 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 PTMAP3-201ENST00000447474 330 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 UQCRHP4-201ENST00000471686 272 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 BET1P1-201ENST00000482276 359 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC105137.1-201ENST00000484355 562 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 SNX5P1-201ENST00000505757 1041 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 HMGB1P28-201ENST00000507778 552 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 PARP4P3-201ENST00000510265 317 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MTND1P22-201ENST00000510572 951 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC010486.3-201ENST00000511602 785 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC018797.3-201ENST00000513388 1241 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MRPL49P2-201ENST00000521066 465 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC022790.1-201ENST00000522872 204 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 MTCO1P47-201ENST00000523889 1271 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 OR5AK1P-201ENST00000524837 922 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AL109766.1-201ENST00000555080 552 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC109446.2-201ENST00000567872 497 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 SNORD39.3-201ENST00000584451 71 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC006539.2-201ENST00000601729 572 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC090181.2-201ENST00000602975 672 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC079587.1-201ENST00000603846 277 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC008966.2-201ENST00000606157 453 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC023043.4-201ENST00000612081 449 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AP000676.3-201ENST00000623299 569 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC068724.3-201ENST00000625906 87 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC140479.6-201ENST00000633535 357 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 ERCC6-202ENST00000374127 1782 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AC093535.2-201ENST00000624769 2326 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
BEST3Q8N1M1 AP001486.2-201ENST00000561652 5113 ntBASIC4.06□□□□□ -1.76
BEST3Q8N1M1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
BEST3Q8N1M1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms