Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RPL9P32-201ENST00000464118 620 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC004069.2-201ENST00000505438 1114 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC109471.1-201ENST00000511631 612 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 MTCO3P27-201ENST00000514397 196 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 MIR2116-201ENST00000517221 80 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL133457.1-201ENST00000564251 987 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC107954.1-201ENST00000565906 727 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 MIR4697-201ENST00000582977 78 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 SNRPGP15-201ENST00000600149 222 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC007687.1-201ENST00000602704 304 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC113368.1-201ENST00000603736 382 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL354760.1-201ENST00000608357 643 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC005156.1-201ENST00000613371 573 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC098679.5-201ENST00000624394 571 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 SNORA31-201ENST00000362607 130 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RNU5B-1-201ENST00000363286 116 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RNU1-13P-201ENST00000384499 162 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL121978.1-201ENST00000402778 359 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RPL7AP73-201ENST00000413490 353 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 HIGD1AP4-201ENST00000430194 280 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RPL21P112-201ENST00000434403 463 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL162151.2-201ENST00000448875 158 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 SYPL1P1-201ENST00000473622 768 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL132838.2-201ENST00000492041 314 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC048346.1-201ENST00000510247 144 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RN7SKP116-201ENST00000516902 319 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 RFPL1S-203ENST00000539579 330 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC091516.1-201ENST00000549191 703 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AGGF1P6-201ENST00000569213 976 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC141257.3-201ENST00000572906 215 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC136624.4-201ENST00000573044 370 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL513477.2-201ENST00000607858 568 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AC092653.1-201ENST00000608509 531 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 ZYXP1-201ENST00000617638 118 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AF001550.2-201ENST00000636643 217 ntBASIC3.55□□□□□ -1.84
NIPAL3Q6P499 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.55□□□□□ -1.84
NIPAL3Q6P499 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
NIPAL3Q6P499 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
NIPAL3Q6P499 ATP5F1P4-201ENST00000397288 746 ntBASIC3.54□□□□□ -1.84
NIPAL3Q6P499 OFD1P18Y-201ENST00000420889 959 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms