Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LONRF3Q496Y0 SAGE4P-201ENST00000442271 3381 ntBASIC5.21□□□□□ -1.58
LONRF3Q496Y0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AP000526.1-201ENST00000603308 1388 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 RNU1-20P-201ENST00000363314 162 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AL590084.2-201ENST00000401481 382 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AL355379.1-201ENST00000405542 640 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 RN7SKP167-201ENST00000411047 285 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 RAB28P1-201ENST00000411517 641 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC140479.3-201ENST00000418944 1126 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC098592.1-201ENST00000419352 333 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 RPL21P91-201ENST00000429231 479 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC091390.1-201ENST00000433904 331 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC016831.4-201ENST00000438302 307 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 USP9YP22-201ENST00000438971 294 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 MTCYBP34-201ENST00000439552 670 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AL590399.6-201ENST00000446396 307 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AL034418.1-201ENST00000448675 860 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 PNPLA4P1-201ENST00000458328 305 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AP000873.1-201ENST00000463987 400 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 BZW1P2-201ENST00000473537 826 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 OR2A20P-203ENST00000498397 1268 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AK3P4-201ENST00000504283 583 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 OR4R3P-201ENST00000525084 838 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC092470.1-201ENST00000546187 132 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC007424.1-203ENST00000554613 687 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC079171.1-201ENST00000568788 914 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC005951.1-201ENST00000576706 485 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC090616.2-202ENST00000584248 222 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 OR4G1P-201ENST00000588632 938 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC023158.2-201ENST00000614876 543 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 AC138649.5-201ENST00000637456 137 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 ZNF542P-204ENST00000482727 1305 ntBASIC5.2□□□□□ -1.58
LONRF3Q496Y0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LONRF3Q496Y0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC117529.2-201ENST00000512159 2068 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC139713.2-214ENST00000642059 1811 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 OR4A15-201ENST00000314706 1035 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 RNA5SP80-201ENST00000410475 111 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 ATG4AP1-201ENST00000416893 538 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 ISCUP1-201ENST00000454451 448 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 RPL31P3-201ENST00000458430 332 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC022795.1-201ENST00000473808 480 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 RAP1BP2-201ENST00000478270 544 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC013828.1-201ENST00000481845 158 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC093267.1-201ENST00000489176 961 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 RPL36AP41-201ENST00000493820 306 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 WBP1LP4-201ENST00000505043 344 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 MIR4697-201ENST00000582977 78 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC025588.3-201ENST00000604182 274 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AL163642.2-201ENST00000604722 1019 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC072039.2-201ENST00000608883 439 ntBASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.19□□□□□ -1.58
LONRF3Q496Y0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms