Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC020893.1-201ENST00000502452 580 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 ARL2BPP6-201ENST00000512757 439 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 PAICSP4-201ENST00000517543 1253 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 KATNBL1P5-201ENST00000605015 517 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 U7.8-201ENST00000619968 63 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC039056.2-201ENST00000622261 511 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC138649.5-201ENST00000637456 137 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS1Q01581 ZNF285B-201ENST00000561698 1767 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL159169.1-201ENST00000421119 127 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC069540.1-201ENST00000446320 988 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 RPL7P15-201ENST00000461190 712 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 RPL37P6-202ENST00000464216 403 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC007537.2-201ENST00000472093 511 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC023598.1-201ENST00000472521 361 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC010468.3-201ENST00000508225 458 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 RNU1-95P-201ENST00000516357 160 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 RNU1-128P-201ENST00000516704 160 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AP002812.4-201ENST00000532139 286 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL121594.4-201ENST00000556211 1196 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 ZNF92P2-201ENST00000600543 1059 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL671309.1-201ENST00000603750 544 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL034351.1-201ENST00000605288 668 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AC006065.5-201ENST00000623427 349 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 AL356094.1-201ENST00000624663 1212 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS1Q01581 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS1Q01581 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
HMGCS1Q01581 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS1Q01581 ZNF33CP-201ENST00000432492 2030 ntBASIC3.36□□□□□ -1.87
HMGCS1Q01581 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC024341.1-201ENST00000526444 1552 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 HMGB1P13-201ENST00000406019 642 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC023128.2-201ENST00000420880 1223 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC023347.2-201ENST00000433994 462 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 PPIAP3-201ENST00000450588 505 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC007967.1-201ENST00000455422 1159 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 MTCO1P30-201ENST00000515244 580 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 TRMT10BP1-201ENST00000519377 943 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AL139174.1-201ENST00000531489 886 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC011602.1-201ENST00000546484 331 ntBASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS1Q01581 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGCS1Q01581 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms