Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 LSM6P2-201ENST00000552208 177 ntBASIC4.39□□□□□ -1.71
RAE1P78406 EDDM3DP-201ENST00000554692 434 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.39□□□□□ -1.71
RAE1P78406 HSPE1P3-201ENST00000559254 309 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AGGF1P8-201ENST00000562979 1000 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC004492.1-201ENST00000607036 742 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 AC015540.1-201ENST00000615828 501 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC006338.2-201ENST00000616864 791 ntBASIC4.39□□□□□ -1.71
RAE1P78406 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.39□□□□□ -1.71
RAE1P78406 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 MTND5P28-201ENST00000438005 1594 ntBASIC4.39□□□□□ -1.71
RAE1P78406 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAE1P78406 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAE1P78406 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 MTND4P16-201ENST00000466108 1367 ntBASIC4.39□□□□□ -1.71
RAE1P78406 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 AC007529.1-201ENST00000418574 2178 ntBASIC4.38□□□□□ -1.71
RAE1P78406 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AL451142.2-201ENST00000429076 2090 ntBASIC4.38□□□□□ -1.71
RAE1P78406 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 AL590240.1-201ENST00000334118 313 ntBASIC4.38□□□□□ -1.71
RAE1P78406 RNU5F-6P-201ENST00000362979 116 ntBASIC4.38□□□□□ -1.71
RAE1P78406 RNU5F-7P-201ENST00000363696 115 ntBASIC4.38□□□□□ -1.71
RAE1P78406 SNORA75-201ENST00000384158 137 ntBASIC4.38□□□□□ -1.71
RAE1P78406 MIR323B-201ENST00000385269 82 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AL121972.1-201ENST00000402023 252 ntBASIC4.38□□□□□ -1.71
RAE1P78406 ZNF603P-201ENST00000405613 487 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
RAE1P78406 RN7SKP167-201ENST00000411047 285 ntBASIC4.38□□□□□ -1.71
RAE1P78406 RPL17P12-201ENST00000413391 526 ntBASIC4.38□□□□□ -1.71
RAE1P78406 HMGB1P11-201ENST00000413899 637 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RAE1P78406 RPS27AP14-201ENST00000422868 454 ntBASIC4.38□□□□□ -1.71
RAE1P78406 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC104837.2-201ENST00000427236 424 ntBASIC4.38□□□□□ -1.71
RAE1P78406 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
RAE1P78406 SNRPEP7-201ENST00000438350 220 ntBASIC4.38□□□□□ -1.71
RAE1P78406 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 CDC27P1-201ENST00000445384 715 ntBASIC4.38□□□□□ -1.71
RAE1P78406 ARPC3P5-201ENST00000448802 534 ntBASIC4.38□□□□□ -1.71
RAE1P78406 DNAJC19P1-201ENST00000455312 319 ntBASIC4.38□□□□□ -1.71
RAE1P78406 TRBV26-201ENST00000456572 344 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC026410.2-201ENST00000460281 156 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC091564.1-201ENST00000464563 479 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC010683.1-201ENST00000473673 378 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 NDUFB5P1-201ENST00000508134 564 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC007016.1-201ENST00000512110 244 ntBASIC4.38□□□□□ -1.71
RAE1P78406 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 OR7H2P-201ENST00000513483 306 ntBASIC4.38□□□□□ -1.71
RAE1P78406 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC116347.2-201ENST00000514912 523 ntBASIC4.38□□□□□ -1.71
RAE1P78406 RNU6-720P-201ENST00000516363 108 ntBASIC4.38□□□□□ -1.71
RAE1P78406 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AC107918.3-201ENST00000533272 382 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.38□□□□□ -1.71
RAE1P78406 AC063949.1-201ENST00000552900 865 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AL390334.1-201ENST00000556395 450 ntBASIC4.38□□□□□ -1.71
RAE1P78406 ATP5J2P6-201ENST00000565203 266 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC016180.1-201ENST00000567945 403 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC141257.3-201ENST00000572906 215 ntBASIC4.38□□□□□ -1.71
RAE1P78406 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.38□□□□□ -1.71
RAE1P78406 AP001094.1-201ENST00000579805 193 ntBASIC4.38□□□□□ -1.71
RAE1P78406 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 AC005084.1-201ENST00000605160 304 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC005332.10-201ENST00000612725 619 ntBASIC4.38□□□□□ -1.71
RAE1P78406 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.38□□□□□ -1.71
RAE1P78406 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 AL355480.1-201ENST00000629041 99 ntBASIC4.38□□□□□ -1.71
RAE1P78406 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAE1P78406 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
RAE1P78406 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.38□□□□□ -1.71
RAE1P78406 AC011978.2-201ENST00000569835 2054 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms