Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VSX2P58304 MIR208A-201ENST00000362287 71 ntBASIC3.38□□□□□ -1.87
VSX2P58304 SNORD51.1-201ENST00000365405 77 ntBASIC3.38□□□□□ -1.87
VSX2P58304 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 MIR124-3-201ENST00000384866 87 ntBASIC3.38□□□□□ -1.87
VSX2P58304 PTMAP5-201ENST00000393073 333 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 AC245052.5-201ENST00000416320 649 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AC068533.1-201ENST00000418542 415 ntBASIC3.38□□□□□ -1.87
VSX2P58304 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.38□□□□□ -1.87
VSX2P58304 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AL035458.1-201ENST00000433096 585 ntBASIC3.38□□□□□ -1.87
VSX2P58304 ZFAND6P1-201ENST00000434138 605 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
VSX2P58304 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
VSX2P58304 NPM1P17-201ENST00000479221 602 ntBASIC3.38□□□□□ -1.87
VSX2P58304 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 OR9N1P-202ENST00000494289 481 ntBASIC3.38□□□□□ -1.87
VSX2P58304 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 AC026784.1-201ENST00000507986 352 ntBASIC3.38□□□□□ -1.87
VSX2P58304 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 RNU6-362P-201ENST00000516736 90 ntBASIC3.38□□□□□ -1.87
VSX2P58304 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 MTND5P21-201ENST00000531961 522 ntBASIC3.38□□□□□ -1.87
VSX2P58304 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.38□□□□□ -1.87
VSX2P58304 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.38□□□□□ -1.87
VSX2P58304 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.38□□□□□ -1.87
VSX2P58304 AP000919.1-202ENST00000581139 1264 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AP001180.3-201ENST00000582221 145 ntBASIC3.38□□□□□ -1.87
VSX2P58304 NF1P5-201ENST00000588287 448 ntBASIC3.38□□□□□ -1.87
VSX2P58304 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.38□□□□□ -1.87
VSX2P58304 AC004775.1-201ENST00000607389 753 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AC092354.2-201ENST00000607786 514 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AL356490.1-201ENST00000623079 479 ntBASIC3.38□□□□□ -1.87
VSX2P58304 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
VSX2P58304 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 RIOK3P1-201ENST00000418778 1528 ntBASIC3.38□□□□□ -1.87
VSX2P58304 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
VSX2P58304 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
VSX2P58304 FRG1CP-201ENST00000358464 769 ntBASIC3.37□□□□□ -1.87
VSX2P58304 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 SNORD115-48-201ENST00000364764 76 ntBASIC3.37□□□□□ -1.87
VSX2P58304 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VSX2P58304 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.37□□□□□ -1.87
VSX2P58304 RNU4-31P-201ENST00000384211 141 ntBASIC3.37□□□□□ -1.87
VSX2P58304 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 MTND3P20-201ENST00000407663 186 ntBASIC3.37□□□□□ -1.87
VSX2P58304 MTND4P22-201ENST00000413116 1169 ntBASIC3.37□□□□□ -1.87
VSX2P58304 AC009237.5-201ENST00000414271 501 ntBASIC3.37□□□□□ -1.87
VSX2P58304 LINC01347-201ENST00000417964 355 ntBASIC3.37□□□□□ -1.87
VSX2P58304 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 RSL24D1P8-201ENST00000434442 492 ntBASIC3.37□□□□□ -1.87
VSX2P58304 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.37□□□□□ -1.87
VSX2P58304 RPS15AP29-201ENST00000445539 400 ntBASIC3.37□□□□□ -1.87
VSX2P58304 MTND2P6-201ENST00000455337 1030 ntBASIC3.37□□□□□ -1.87
VSX2P58304 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 RPL7P49-201ENST00000471402 708 ntBASIC3.37□□□□□ -1.87
VSX2P58304 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
VSX2P58304 AC092451.1-201ENST00000480211 153 ntBASIC3.37□□□□□ -1.87
VSX2P58304 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.37□□□□□ -1.87
VSX2P58304 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.37□□□□□ -1.87
VSX2P58304 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.37□□□□□ -1.87
VSX2P58304 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.37□□□□□ -1.87
VSX2P58304 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.37□□□□□ -1.87
VSX2P58304 CYP2C60P-201ENST00000566088 139 ntBASIC3.37□□□□□ -1.87
VSX2P58304 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.37□□□□□ -1.87
VSX2P58304 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
VSX2P58304 AC113194.1-201ENST00000606037 500 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms