Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PGBD4P8-201ENST00000412993 562 ntBASIC4.04□□□□□ -1.76
CDH13P55290 KRR1P1-201ENST00000419430 803 ntBASIC4.04□□□□□ -1.76
CDH13P55290 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 OR51AB1P-201ENST00000429046 620 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 CR769776.1-201ENST00000441254 787 ntBASIC4.04□□□□□ -1.76
CDH13P55290 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.04□□□□□ -1.76
CDH13P55290 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 RPL23AP24-201ENST00000458203 385 ntBASIC4.04□□□□□ -1.76
CDH13P55290 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 RPL35P6-201ENST00000490024 372 ntBASIC4.04□□□□□ -1.76
CDH13P55290 RPS23P1-201ENST00000491662 432 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 IGKV2-38-201ENST00000517443 247 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AP000619.3-201ENST00000535634 1127 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC092470.1-201ENST00000546187 132 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH13P55290 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH13P55290 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 RPL23AP87-202ENST00000573039 466 ntBASIC4.04□□□□□ -1.76
CDH13P55290 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 MTND3P19-201ENST00000603825 345 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC092954.1-201ENST00000609121 445 ntBASIC4.04□□□□□ -1.76
CDH13P55290 FAM27D1-201ENST00000612308 341 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC090246.1-201ENST00000616499 426 ntBASIC4.04□□□□□ -1.76
CDH13P55290 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH13P55290 AC009452.1-201ENST00000640823 606 ntBASIC4.04□□□□□ -1.76
CDH13P55290 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH13P55290 MTCO1P24-201ENST00000515438 1558 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 Z82217.1-201ENST00000625157 8149 ntBASIC4.04□□□□□ -1.76
CDH13P55290 PABPC1P7-201ENST00000413177 1513 ntBASIC4.04□□□□□ -1.76
CDH13P55290 AC053481.2-202ENST00000582394 1500 ntBASIC4.04□□□□□ -1.76
CDH13P55290 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH13P55290 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH13P55290 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH13P55290 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH13P55290 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH13P55290 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 MTCO1P48-201ENST00000448024 1096 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH13P55290 MTCO3P35-201ENST00000485582 781 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC013356.1-201ENST00000489027 564 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 TMEM248P1-201ENST00000510579 951 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC008958.1-201ENST00000511047 682 ntBASIC4.03□□□□□ -1.76
CDH13P55290 KCTD9P2-201ENST00000512203 1013 ntBASIC4.03□□□□□ -1.76
CDH13P55290 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
CDH13P55290 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 AC137768.1-201ENST00000549998 553 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AL389895.1-201ENST00000554127 252 ntBASIC4.03□□□□□ -1.76
CDH13P55290 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH13P55290 TRAV15-201ENST00000556680 249 ntBASIC4.03□□□□□ -1.76
CDH13P55290 TVP23BP1-201ENST00000557500 617 ntBASIC4.03□□□□□ -1.76
CDH13P55290 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH13P55290 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC079171.1-201ENST00000568788 914 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC138915.2-201ENST00000569776 97 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH13P55290 AC022655.2-201ENST00000577280 318 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AC022662.1-201ENST00000580252 331 ntBASIC4.03□□□□□ -1.76
CDH13P55290 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH13P55290 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH13P55290 YWHAQP7-201ENST00000603536 658 ntBASIC4.03□□□□□ -1.76
CDH13P55290 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH13P55290 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH13P55290 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDH13P55290 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CDH13P55290 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 AC139713.2-214ENST00000642059 1811 ntBASIC4.02□□□□□ -1.77
CDH13P55290 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH13P55290 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
CDH13P55290 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDH13P55290 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms