Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH4P55283 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH4P55283 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH4P55283 MIR4429-201ENST00000580105 73 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC006077.1-201ENST00000604746 343 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AL034351.1-201ENST00000605288 668 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AL450270.1-201ENST00000606160 391 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC112200.1-201ENST00000625015 234 ntBASIC3.7□□□□□ -1.82
CDH4P55283 FRG1DP-201ENST00000635586 771 ntBASIC3.7□□□□□ -1.82
CDH4P55283 OR8B1P-202ENST00000641132 1178 ntBASIC3.7□□□□□ -1.82
CDH4P55283 AC090337.1-201ENST00000579651 2074 ntBASIC3.7□□□□□ -1.82
CDH4P55283 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 MFSD8-236ENST00000641509 4050 ntBASIC3.7□□□□□ -1.82
CDH4P55283 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH4P55283 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH4P55283 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH4P55283 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDH4P55283 RNU6-543P-201ENST00000362576 108 ntBASIC3.69□□□□□ -1.82
CDH4P55283 RNA5SP322-201ENST00000363617 119 ntBASIC3.69□□□□□ -1.82
CDH4P55283 RHEBP3-201ENST00000411920 351 ntBASIC3.69□□□□□ -1.82
CDH4P55283 RPS20P25-201ENST00000412447 352 ntBASIC3.69□□□□□ -1.82
CDH4P55283 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH4P55283 AC241520.1-201ENST00000422654 1099 ntBASIC3.69□□□□□ -1.82
CDH4P55283 PNRC2P1-201ENST00000423940 420 ntBASIC3.69□□□□□ -1.82
CDH4P55283 SDCBPP2-201ENST00000424643 885 ntBASIC3.69□□□□□ -1.82
CDH4P55283 MOB1AP1-201ENST00000430903 535 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AL050321.1-201ENST00000432363 400 ntBASIC3.69□□□□□ -1.82
CDH4P55283 VN1R34P-201ENST00000447387 883 ntBASIC3.69□□□□□ -1.82
CDH4P55283 RPL29P29-201ENST00000448725 423 ntBASIC3.69□□□□□ -1.82
CDH4P55283 MRPL35P4-201ENST00000453682 566 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AC108729.2-201ENST00000476543 840 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AC006499.5-201ENST00000505037 514 ntBASIC3.69□□□□□ -1.82
CDH4P55283 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH4P55283 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH4P55283 RN7SKP157-201ENST00000516174 282 ntBASIC3.69□□□□□ -1.82
CDH4P55283 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
CDH4P55283 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH4P55283 AP000926.4-201ENST00000527351 454 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH4P55283 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH4P55283 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH4P55283 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH4P55283 SERPINE4P-201ENST00000554978 281 ntBASIC3.69□□□□□ -1.82
CDH4P55283 MIR4444-1-201ENST00000581696 74 ntBASIC3.69□□□□□ -1.82
CDH4P55283 MIR4444-2-201ENST00000584390 74 ntBASIC3.69□□□□□ -1.82
CDH4P55283 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH4P55283 AC006116.10-201ENST00000591836 581 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AC125494.3-201ENST00000602759 455 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH4P55283 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH4P55283 AC024595.1-201ENST00000623088 387 ntBASIC3.69□□□□□ -1.82
CDH4P55283 AP003355.3-201ENST00000623465 114 ntBASIC3.69□□□□□ -1.82
CDH4P55283 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH4P55283 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDH4P55283 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH4P55283 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH4P55283 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.69□□□□□ -1.82
CDH4P55283 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH4P55283 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH4P55283 UBE2V1P11-201ENST00000411559 285 ntBASIC3.68□□□□□ -1.82
CDH4P55283 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH4P55283 RSL24D1P8-201ENST00000434442 492 ntBASIC3.68□□□□□ -1.82
CDH4P55283 RPL23AP33-201ENST00000442301 452 ntBASIC3.68□□□□□ -1.82
CDH4P55283 HMGN2P21-201ENST00000447764 270 ntBASIC3.68□□□□□ -1.82
CDH4P55283 PDSS1P2-201ENST00000449397 678 ntBASIC3.68□□□□□ -1.82
CDH4P55283 RPL23AP15-201ENST00000450202 459 ntBASIC3.68□□□□□ -1.82
CDH4P55283 MTND2P3-201ENST00000452458 470 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH4P55283 TVP23BP2-201ENST00000455082 615 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AP001086.1-201ENST00000494882 321 ntBASIC3.68□□□□□ -1.82
CDH4P55283 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH4P55283 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH4P55283 RNU4-60P-201ENST00000517239 135 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH4P55283 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH4P55283 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH4P55283 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH4P55283 AC006270.2-201ENST00000578523 652 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AC040174.2-201ENST00000602701 465 ntBASIC3.68□□□□□ -1.82
CDH4P55283 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH4P55283 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH4P55283 STMN1P1-201ENST00000617809 440 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AL590396.2-201ENST00000636511 1041 ntBASIC3.68□□□□□ -1.82
CDH4P55283 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH4P55283 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH4P55283 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms