Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.91□□□□□ -1.78
SSR1P43307 AC034268.2-201ENST00000571784 482 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 CBX3P2-202ENST00000583365 535 ntBASIC3.91□□□□□ -1.78
SSR1P43307 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.91□□□□□ -1.78
SSR1P43307 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.91□□□□□ -1.78
SSR1P43307 HMGN2P28-201ENST00000606102 262 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AC005344.1-201ENST00000613391 459 ntBASIC3.91□□□□□ -1.78
SSR1P43307 AL590240.3-201ENST00000621416 943 ntBASIC3.91□□□□□ -1.78
SSR1P43307 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.91□□□□□ -1.78
SSR1P43307 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSR1P43307 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSR1P43307 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSR1P43307 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.91□□□□□ -1.78
SSR1P43307 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSR1P43307 EIF5P1-201ENST00000400019 1231 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.9□□□□□ -1.79
SSR1P43307 HMGB3P23-201ENST00000414981 585 ntBASIC3.9□□□□□ -1.79
SSR1P43307 LINC01347-201ENST00000417964 355 ntBASIC3.9□□□□□ -1.79
SSR1P43307 RPL17P36-201ENST00000420302 549 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.9□□□□□ -1.79
SSR1P43307 RPL7P2-201ENST00000427639 268 ntBASIC3.9□□□□□ -1.79
SSR1P43307 SKP1P1-201ENST00000438081 489 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 H2AFZP6-201ENST00000444403 394 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.9□□□□□ -1.79
SSR1P43307 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
SSR1P43307 RPS26P21-201ENST00000475397 348 ntBASIC3.9□□□□□ -1.79
SSR1P43307 HMGN2P13-201ENST00000476476 274 ntBASIC3.9□□□□□ -1.79
SSR1P43307 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.9□□□□□ -1.79
SSR1P43307 AC108860.1-201ENST00000484521 383 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AC021146.5-201ENST00000503544 545 ntBASIC3.9□□□□□ -1.79
SSR1P43307 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSR1P43307 CYCSP30-201ENST00000546447 172 ntBASIC3.9□□□□□ -1.79
SSR1P43307 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.9□□□□□ -1.79
SSR1P43307 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 MIR4286-201ENST00000580651 93 ntBASIC3.9□□□□□ -1.79
SSR1P43307 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
SSR1P43307 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.9□□□□□ -1.79
SSR1P43307 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 AP004289.2-201ENST00000444413 1457 ntBASIC3.9□□□□□ -1.79
SSR1P43307 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SSR1P43307 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.9□□□□□ -1.79
SSR1P43307 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.9□□□□□ -1.79
SSR1P43307 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.9□□□□□ -1.79
SSR1P43307 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 AC116096.1-201ENST00000566804 2314 ntBASIC3.89□□□□□ -1.79
SSR1P43307 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 SNORA70.2-201ENST00000364506 135 ntBASIC3.89□□□□□ -1.79
SSR1P43307 RNU6-1005P-201ENST00000384519 107 ntBASIC3.89□□□□□ -1.79
SSR1P43307 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 ARL2BPP3-201ENST00000421226 480 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 NDUFB1P1-201ENST00000435191 180 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.89□□□□□ -1.79
SSR1P43307 RPS29P7-201ENST00000439662 171 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.89□□□□□ -1.79
SSR1P43307 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.89□□□□□ -1.79
SSR1P43307 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSR1P43307 RN7SL385P-201ENST00000468873 276 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC104687.1-201ENST00000485829 412 ntBASIC3.89□□□□□ -1.79
SSR1P43307 VN1R105P-201ENST00000486595 910 ntBASIC3.89□□□□□ -1.79
SSR1P43307 OR9N1P-202ENST00000494289 481 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC005726.1-201ENST00000494679 427 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC010285.3-201ENST00000511668 676 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.89□□□□□ -1.79
SSR1P43307 CKS1BP1-201ENST00000555221 240 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC007224.1-201ENST00000564410 144 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.89□□□□□ -1.79
SSR1P43307 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.89□□□□□ -1.79
SSR1P43307 AC053481.4-201ENST00000583164 216 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC015802.5-201ENST00000607478 399 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC020658.4-201ENST00000613987 684 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC025016.1-201ENST00000616746 682 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AL162233.1-201ENST00000620014 944 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AL354798.1-201ENST00000622505 329 ntBASIC3.89□□□□□ -1.79
SSR1P43307 RNA5SP196-201ENST00000625967 102 ntBASIC3.89□□□□□ -1.79
SSR1P43307 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSR1P43307 AC073073.2-201ENST00000609827 2578 ntBASIC3.89□□□□□ -1.79
SSR1P43307 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSR1P43307 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSR1P43307 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.88□□□□□ -1.79
SSR1P43307 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSR1P43307 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.88□□□□□ -1.79
SSR1P43307 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSR1P43307 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.88□□□□□ -1.79
SSR1P43307 HSPE1P1-201ENST00000421494 318 ntBASIC3.88□□□□□ -1.79
SSR1P43307 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.88□□□□□ -1.79
SSR1P43307 AC244098.2-201ENST00000422068 99 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms