Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXA13P31271 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA13P31271 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXA13P31271 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA13P31271 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA13P31271 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 AL592437.2-201ENST00000421655 2434 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA13P31271 HMGB1P5-201ENST00000255320 642 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 RNU1-87P-201ENST00000363727 170 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 SNORA62.3-201ENST00000365110 153 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA13P31271 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HOXA13P31271 Y_RNA.472-201ENST00000384322 102 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 U8.11-201ENST00000384699 133 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 U8.12-201ENST00000384701 133 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 DSTNP4-201ENST00000399472 474 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 RNU6ATAC-201ENST00000408749 126 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA13P31271 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HOXA13P31271 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA13P31271 MTCO1P3-201ENST00000429327 192 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 MOB1AP1-201ENST00000430903 535 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AC010881.1-201ENST00000433830 235 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 GOT2P5-201ENST00000433995 546 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 PTGES3P5-201ENST00000455109 434 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 RPS15AP1-201ENST00000457423 391 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA13P31271 AL139824.2-201ENST00000458731 1095 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 U8.18-201ENST00000459285 133 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 GAPDHP39-201ENST00000481866 979 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 RPL31P61-201ENST00000496160 376 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXA13P31271 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA13P31271 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA13P31271 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 OR5M7P-201ENST00000526140 972 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 OR4A12P-201ENST00000530847 918 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA13P31271 MIR4429-201ENST00000580105 73 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AC022069.1-201ENST00000582910 658 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA13P31271 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA13P31271 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 AL353600.1-201ENST00000608148 251 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 CR392039.5-201ENST00000623201 510 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AF001550.2-201ENST00000636643 217 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 DCAF13P3-201ENST00000561147 1334 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 AC007529.1-201ENST00000418574 2178 ntBASIC4.43□□□□□ -1.7
HOXA13P31271 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA13P31271 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA13P31271 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA13P31271 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXA13P31271 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA13P31271 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA13P31271 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA13P31271 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 SNORA3.3-201ENST00000408712 125 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA13P31271 AL035246.1-201ENST00000433554 1255 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 NOTCH2P1-201ENST00000443481 624 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 NDUFA5P7-201ENST00000452914 242 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 RPS20P21-201ENST00000466859 343 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 RPL21P129-201ENST00000491732 478 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 RPL7P24-201ENST00000493052 752 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC084024.2-201ENST00000503480 791 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 Y_RNA.717-201ENST00000517106 92 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA13P31271 SOD1P3-201ENST00000518682 454 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXA13P31271 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA13P31271 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXA13P31271 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 EIF5A2P1-201ENST00000564027 460 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC009712.1-201ENST00000564938 316 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 MTND3P13-201ENST00000574391 343 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXA13P31271 MIR4504-201ENST00000577413 92 ntBASIC4.42□□□□□ -1.7
HOXA13P31271 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA13P31271 AC112230.1-201ENST00000604342 547 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms