Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.65□□□□□ -1.83
SHC1P29353 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 RPS11P1-201ENST00000451072 473 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.65□□□□□ -1.83
SHC1P29353 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 RNU7-140P-201ENST00000459546 60 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC023050.1-201ENST00000498198 304 ntBASIC3.65□□□□□ -1.83
SHC1P29353 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.65□□□□□ -1.83
SHC1P29353 AC119751.1-201ENST00000513357 765 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC118465.1-201ENST00000513820 1271 ntBASIC3.65□□□□□ -1.83
SHC1P29353 RNA5SP143-201ENST00000516936 115 ntBASIC3.65□□□□□ -1.83
SHC1P29353 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SHC1P29353 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 DEFB130C-202ENST00000530001 230 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.65□□□□□ -1.83
SHC1P29353 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.65□□□□□ -1.83
SHC1P29353 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.65□□□□□ -1.83
SHC1P29353 AC025627.2-201ENST00000576220 160 ntBASIC3.65□□□□□ -1.83
SHC1P29353 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 AC010620.1-201ENST00000601088 1102 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC146944.4-201ENST00000602697 718 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC067959.1-201ENST00000604334 379 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AP000255.1-201ENST00000610276 676 ntBASIC3.65□□□□□ -1.83
SHC1P29353 MIR486-1-201ENST00000612171 68 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC024257.5-201ENST00000612739 531 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC123768.4-201ENST00000616244 701 ntBASIC3.65□□□□□ -1.83
SHC1P29353 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.65□□□□□ -1.83
SHC1P29353 AL158163.2-201ENST00000619110 700 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC112484.5-201ENST00000624189 228 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AP005264.7-201ENST00000625003 745 ntBASIC3.65□□□□□ -1.83
SHC1P29353 AC068724.3-201ENST00000625906 87 ntBASIC3.65□□□□□ -1.83
SHC1P29353 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.65□□□□□ -1.83
SHC1P29353 LINC02211-204ENST00000642024 1070 ntBASIC3.65□□□□□ -1.83
SHC1P29353 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHC1P29353 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SHC1P29353 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
SHC1P29353 AC008725.1-201ENST00000605123 2263 ntBASIC3.64□□□□□ -1.83
SHC1P29353 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 RNU6-543P-201ENST00000362576 108 ntBASIC3.64□□□□□ -1.83
SHC1P29353 RNA5SP515-201ENST00000364570 118 ntBASIC3.64□□□□□ -1.83
SHC1P29353 RNA5SP479-201ENST00000364858 117 ntBASIC3.64□□□□□ -1.83
SHC1P29353 RNA5SP283-201ENST00000365604 119 ntBASIC3.64□□□□□ -1.83
SHC1P29353 DNAJC19P6-201ENST00000401853 280 ntBASIC3.64□□□□□ -1.83
SHC1P29353 FABP12P1-201ENST00000401911 322 ntBASIC3.64□□□□□ -1.83
SHC1P29353 SFR1P1-201ENST00000403720 688 ntBASIC3.64□□□□□ -1.83
SHC1P29353 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.64□□□□□ -1.83
SHC1P29353 ELOCP9-201ENST00000418624 239 ntBASIC3.64□□□□□ -1.83
SHC1P29353 MTND2P18-201ENST00000419962 1030 ntBASIC3.64□□□□□ -1.83
SHC1P29353 RAC1P8-201ENST00000427086 527 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.64□□□□□ -1.83
SHC1P29353 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 RPL21P133-201ENST00000443666 476 ntBASIC3.64□□□□□ -1.83
SHC1P29353 HMGB3P21-201ENST00000452483 547 ntBASIC3.64□□□□□ -1.83
SHC1P29353 ART2BP-201ENST00000453501 499 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AL035407.2-201ENST00000454090 378 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SHC1P29353 AC010468.1-201ENST00000461022 817 ntBASIC3.64□□□□□ -1.83
SHC1P29353 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 AC010683.1-201ENST00000473673 378 ntBASIC3.64□□□□□ -1.83
SHC1P29353 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 BET1P1-201ENST00000482276 359 ntBASIC3.64□□□□□ -1.83
SHC1P29353 PRELID3BP7-201ENST00000503606 469 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC018797.3-201ENST00000513388 1241 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC010342.1-201ENST00000514047 877 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 RN7SKP21-201ENST00000516503 220 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.64□□□□□ -1.83
SHC1P29353 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.64□□□□□ -1.83
SHC1P29353 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 AC007224.1-201ENST00000564410 144 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.64□□□□□ -1.83
SHC1P29353 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHC1P29353 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.64□□□□□ -1.83
SHC1P29353 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.64□□□□□ -1.83
SHC1P29353 AL020997.3-201ENST00000602843 359 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC104662.1-201ENST00000604448 511 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC010857.1-201ENST00000606398 594 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC016877.3-201ENST00000606778 504 ntBASIC3.64□□□□□ -1.83
SHC1P29353 RNU4-89P-201ENST00000607443 133 ntBASIC3.64□□□□□ -1.83
SHC1P29353 AC245008.1-201ENST00000608123 476 ntBASIC3.64□□□□□ -1.83
SHC1P29353 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.64□□□□□ -1.83
SHC1P29353 AC243654.2-201ENST00000612843 443 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms