Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNA5SP502-201ENST00000362694 119 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC126124.2-201ENST00000413542 321 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC127526.1-201ENST00000417526 366 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
COL5A1P20908 MTCO3P17-201ENST00000443775 513 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.07□□□□□ -1.92
COL5A1P20908 RPS29P26-201ENST00000477483 171 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 RN7SL432P-201ENST00000484057 298 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.07□□□□□ -1.92
COL5A1P20908 RN7SKP116-201ENST00000516902 319 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 AC105036.1-201ENST00000566222 271 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 IGHVIII-44-202ENST00000636235 289 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 SPATA2P1-201ENST00000431223 2055 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL5A1P20908 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL5A1P20908 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL5A1P20908 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.07□□□□□ -1.92
COL5A1P20908 AC073069.1-201ENST00000428657 441 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 ETF1P3-201ENST00000430422 1160 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 AC112492.1-201ENST00000449607 712 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC010401.1-201ENST00000463867 348 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.07□□□□□ -1.92
COL5A1P20908 MTCO3P42-201ENST00000509488 518 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 MTCO3P39-201ENST00000514812 518 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.07□□□□□ -1.92
COL5A1P20908 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AP000859.1-201ENST00000525536 307 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AP002404.1-201ENST00000532005 451 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.07□□□□□ -1.92
COL5A1P20908 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.07□□□□□ -1.92
COL5A1P20908 AL161912.3-201ENST00000605404 628 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 CYCSP41-201ENST00000616920 296 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 AC010809.3-201ENST00000621310 641 ntBASIC3.07□□□□□ -1.92
COL5A1P20908 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
COL5A1P20908 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A1P20908 AC096644.4-201ENST00000563417 2912 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 AL672296.1-201ENST00000427780 2158 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A1P20908 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
COL5A1P20908 RIOK3P1-201ENST00000418778 1528 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.06□□□□□ -1.92
COL5A1P20908 RNU6-167P-201ENST00000384292 106 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 RNA5SP184-201ENST00000411071 108 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 RPS26P40-201ENST00000435209 294 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.06□□□□□ -1.92
COL5A1P20908 RPS24P13-201ENST00000442520 397 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 S100A11P1-201ENST00000477525 312 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A1P20908 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A1P20908 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.06□□□□□ -1.92
COL5A1P20908 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.06□□□□□ -1.92
COL5A1P20908 AC124856.1-201ENST00000600819 896 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 RPL23AP92-201ENST00000603609 255 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 RMST_8.1-201ENST00000610287 165 ntBASIC3.06□□□□□ -1.92
COL5A1P20908 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
COL5A1P20908 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
COL5A1P20908 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A1P20908 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
COL5A1P20908 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL5A1P20908 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A1P20908 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A1P20908 AL035407.1-201ENST00000429211 571 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC108734.1-201ENST00000439549 399 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 FDX1P2-201ENST00000450769 375 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.05□□□□□ -1.92
COL5A1P20908 RNU1-41P-201ENST00000516161 162 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 RNU6-751P-201ENST00000516382 101 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 RNU1-48P-201ENST00000516400 162 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC015911.5-201ENST00000587076 451 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AC112503.1-201ENST00000608436 391 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AL359535.1-201ENST00000612100 1087 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AL592295.2-201ENST00000612578 206 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 AP003485.2-201ENST00000623636 610 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 DDX18P3-201ENST00000404856 2007 ntBASIC3.05□□□□□ -1.92
COL5A1P20908 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
COL5A1P20908 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
COL5A1P20908 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL5A1P20908 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.05□□□□□ -1.92
COL5A1P20908 RPS12P18-201ENST00000442381 270 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms