Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TOP1P11387 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
TOP1P11387 RNU2-58P-201ENST00000516403 183 ntBASIC4.12□□□□□ -1.75
TOP1P11387 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP1P11387 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.12□□□□□ -1.75
TOP1P11387 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.12□□□□□ -1.75
TOP1P11387 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 MTCO3P22-201ENST00000603219 784 ntBASIC4.12□□□□□ -1.75
TOP1P11387 AC073111.2-201ENST00000605657 1075 ntBASIC4.12□□□□□ -1.75
TOP1P11387 AC012531.5-201ENST00000611375 151 ntBASIC4.12□□□□□ -1.75
TOP1P11387 AC024023.1-201ENST00000624530 922 ntBASIC4.12□□□□□ -1.75
TOP1P11387 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TOP1P11387 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.12□□□□□ -1.75
TOP1P11387 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.12□□□□□ -1.75
TOP1P11387 MTCO1P12-201ENST00000414273 1543 ntBASIC4.11□□□□□ -1.75
TOP1P11387 MTCO1P8-201ENST00000416914 1523 ntBASIC4.11□□□□□ -1.75
TOP1P11387 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP1P11387 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP1P11387 FRG1CP-201ENST00000358464 769 ntBASIC4.11□□□□□ -1.75
TOP1P11387 RNA5SP50-201ENST00000363731 107 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC234772.1-201ENST00000377927 937 ntBASIC4.11□□□□□ -1.75
TOP1P11387 MIR490-201ENST00000384865 128 ntBASIC4.11□□□□□ -1.75
TOP1P11387 DNAJC19P6-201ENST00000401853 280 ntBASIC4.11□□□□□ -1.75
TOP1P11387 MTND4P22-201ENST00000413116 1169 ntBASIC4.11□□□□□ -1.75
TOP1P11387 RPS7P15-201ENST00000415804 584 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC017079.2-201ENST00000416102 485 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC244453.4-201ENST00000419150 388 ntBASIC4.11□□□□□ -1.75
TOP1P11387 BX842559.1-201ENST00000419615 532 ntBASIC4.11□□□□□ -1.75
TOP1P11387 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.11□□□□□ -1.75
TOP1P11387 RPL29P29-201ENST00000448725 423 ntBASIC4.11□□□□□ -1.75
TOP1P11387 CYCSP35-201ENST00000451978 304 ntBASIC4.11□□□□□ -1.75
TOP1P11387 CEACAMP4-201ENST00000457676 421 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC084357.1-201ENST00000473404 255 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC092451.1-201ENST00000480211 153 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC104687.1-201ENST00000485829 412 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC005921.1-201ENST00000510589 286 ntBASIC4.11□□□□□ -1.75
TOP1P11387 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 OR8L1P-201ENST00000534005 955 ntBASIC4.11□□□□□ -1.75
TOP1P11387 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.11□□□□□ -1.75
TOP1P11387 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.11□□□□□ -1.75
TOP1P11387 AC084757.4-201ENST00000616350 526 ntBASIC4.11□□□□□ -1.75
TOP1P11387 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TOP1P11387 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.11□□□□□ -1.75
TOP1P11387 MFSD8-233ENST00000641482 4860 ntBASIC4.11□□□□□ -1.75
TOP1P11387 GABPAP-201ENST00000419271 1356 ntBASIC4.11□□□□□ -1.75
TOP1P11387 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
TOP1P11387 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 RNU4-35P-201ENST00000362588 141 ntBASIC4.1□□□□□ -1.75
TOP1P11387 SNORD6-201ENST00000365444 73 ntBASIC4.1□□□□□ -1.75
TOP1P11387 SNORD17-201ENST00000390930 237 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP1P11387 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP1P11387 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP1P11387 MTCO1P57-201ENST00000432182 261 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AC025518.1-201ENST00000479856 347 ntBASIC4.1□□□□□ -1.75
TOP1P11387 MTND3P6-201ENST00000485242 339 ntBASIC4.1□□□□□ -1.75
TOP1P11387 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP1P11387 AC026784.1-201ENST00000507986 352 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.1□□□□□ -1.75
TOP1P11387 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP1P11387 COX6B1P6-201ENST00000522347 255 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP1P11387 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 OR6C73P-201ENST00000546432 358 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP1P11387 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP1P11387 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.1□□□□□ -1.75
TOP1P11387 MIR3944-201ENST00000581277 108 ntBASIC4.1□□□□□ -1.75
TOP1P11387 CCDC58P3-201ENST00000590792 430 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AL592295.2-201ENST00000612578 206 ntBASIC4.1□□□□□ -1.75
TOP1P11387 MIR7975-201ENST00000619350 68 ntBASIC4.1□□□□□ -1.75
TOP1P11387 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP1P11387 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
TOP1P11387 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.1□□□□□ -1.75
TOP1P11387 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 PRO1804-201ENST00000623780 2050 ntBASIC4.1□□□□□ -1.75
TOP1P11387 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TOP1P11387 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TOP1P11387 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TOP1P11387 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP1P11387 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP1P11387 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP1P11387 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP1P11387 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP1P11387 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.09□□□□□ -1.75
TOP1P11387 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.09□□□□□ -1.75
TOP1P11387 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP1P11387 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TOP1P11387 SNORA31-201ENST00000362607 130 ntBASIC4.09□□□□□ -1.75
TOP1P11387 MIR184-201ENST00000384962 84 ntBASIC4.09□□□□□ -1.75
TOP1P11387 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms