Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORA71.1-201ENST00000364523 117 ntBASIC3.09□□□□□ -1.91
TNFP01375 RNU1-140P-201ENST00000365040 165 ntBASIC3.09□□□□□ -1.91
TNFP01375 SNORD6-201ENST00000365444 73 ntBASIC3.09□□□□□ -1.91
TNFP01375 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFP01375 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFP01375 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
TNFP01375 MTCO1P45-201ENST00000431457 267 ntBASIC3.09□□□□□ -1.91
TNFP01375 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFP01375 ELOCP10-201ENST00000440624 327 ntBASIC3.09□□□□□ -1.91
TNFP01375 AC069540.1-201ENST00000446320 988 ntBASIC3.09□□□□□ -1.91
TNFP01375 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TNFP01375 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFP01375 RNU7-170P-201ENST00000459303 61 ntBASIC3.09□□□□□ -1.91
TNFP01375 TRBV8-2-201ENST00000475637 270 ntBASIC3.09□□□□□ -1.91
TNFP01375 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
TNFP01375 AL139174.1-201ENST00000531489 886 ntBASIC3.09□□□□□ -1.91
TNFP01375 AC022080.3-201ENST00000544433 482 ntBASIC3.09□□□□□ -1.91
TNFP01375 AL451007.1-201ENST00000595491 289 ntBASIC3.09□□□□□ -1.91
TNFP01375 ELOCP34-201ENST00000604436 327 ntBASIC3.09□□□□□ -1.91
TNFP01375 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TNFP01375 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TNFP01375 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.09□□□□□ -1.92
TNFP01375 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
TNFP01375 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.09□□□□□ -1.92
TNFP01375 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TNFP01375 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
TNFP01375 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TNFP01375 AC058791.1-201ENST00000608412 3198 ntBASIC3.08□□□□□ -1.92
TNFP01375 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFP01375 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFP01375 SNORA11C-201ENST00000408532 129 ntBASIC3.08□□□□□ -1.92
TNFP01375 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
TNFP01375 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
TNFP01375 RPL35AP12-201ENST00000425362 338 ntBASIC3.08□□□□□ -1.92
TNFP01375 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.08□□□□□ -1.92
TNFP01375 RSL24D1P3-201ENST00000449255 495 ntBASIC3.08□□□□□ -1.92
TNFP01375 AC140076.1-201ENST00000449897 361 ntBASIC3.08□□□□□ -1.92
TNFP01375 HMGN2P7-201ENST00000456186 273 ntBASIC3.08□□□□□ -1.92
TNFP01375 RPL7P48-201ENST00000461513 746 ntBASIC3.08□□□□□ -1.92
TNFP01375 RPL23AP62-201ENST00000463396 453 ntBASIC3.08□□□□□ -1.92
TNFP01375 RPL23AP14-201ENST00000468281 468 ntBASIC3.08□□□□□ -1.92
TNFP01375 AC011825.1-201ENST00000484967 388 ntBASIC3.08□□□□□ -1.92
TNFP01375 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
TNFP01375 RN7SKP60-201ENST00000516985 239 ntBASIC3.08□□□□□ -1.92
TNFP01375 RN7SKP272-201ENST00000516988 232 ntBASIC3.08□□□□□ -1.92
TNFP01375 RN7SKP5-201ENST00000517045 272 ntBASIC3.08□□□□□ -1.92
TNFP01375 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TNFP01375 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFP01375 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
TNFP01375 PRELID3BP8-201ENST00000604148 295 ntBASIC3.08□□□□□ -1.92
TNFP01375 AL592295.2-201ENST00000612578 206 ntBASIC3.08□□□□□ -1.92
TNFP01375 CFTRP2-201ENST00000634304 199 ntBASIC3.08□□□□□ -1.92
TNFP01375 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFP01375 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.08□□□□□ -1.92
TNFP01375 RIOK3P1-201ENST00000418778 1528 ntBASIC3.08□□□□□ -1.92
TNFP01375 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFP01375 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 ZNF807-201ENST00000328088 1707 ntBASIC3.07□□□□□ -1.92
TNFP01375 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 FAR1P1-201ENST00000427163 934 ntBASIC3.07□□□□□ -1.92
TNFP01375 MTND2P2-201ENST00000434633 945 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC108734.1-201ENST00000439549 399 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFP01375 NANOGNBP1-201ENST00000448444 480 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC004801.2-202ENST00000463559 283 ntBASIC3.07□□□□□ -1.92
TNFP01375 TMED11P-201ENST00000479478 690 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFP01375 AL121603.1-201ENST00000553815 142 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 MIR5047-201ENST00000579212 100 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC005242.1-201ENST00000585658 438 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC022146.1-201ENST00000595307 847 ntBASIC3.07□□□□□ -1.92
TNFP01375 AC105227.2-201ENST00000615075 605 ntBASIC3.07□□□□□ -1.92
TNFP01375 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.07□□□□□ -1.92
TNFP01375 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TNFP01375 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFP01375 AC009313.2-201ENST00000417893 1941 ntBASIC3.07□□□□□ -1.92
TNFP01375 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFP01375 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFP01375 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFP01375 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TNFP01375 U3.15-201ENST00000365398 212 ntBASIC3.06□□□□□ -1.92
TNFP01375 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFP01375 AC022022.1-201ENST00000430304 178 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC022018.1-201ENST00000430685 241 ntBASIC3.06□□□□□ -1.92
TNFP01375 SPATA2P1-201ENST00000431223 2055 ntBASIC3.06□□□□□ -1.92
TNFP01375 AC011242.1-201ENST00000433596 1158 ntBASIC3.06□□□□□ -1.92
TNFP01375 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFP01375 AC245517.2-201ENST00000442890 346 ntBASIC3.06□□□□□ -1.92
TNFP01375 HMGB3P21-201ENST00000452483 547 ntBASIC3.06□□□□□ -1.92
TNFP01375 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms