Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAPGEF3O95398 MIR1911-201ENST00000410783 80 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC245052.5-201ENST00000416320 649 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 MTCO3P21-201ENST00000430791 643 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 NMNAT1P2-201ENST00000435192 860 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAPGEF3O95398 RFC5P1-201ENST00000454419 874 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 BX510359.1-201ENST00000456973 237 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 RPL7P1-201ENST00000468161 747 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 RPL7P18-201ENST00000478965 734 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 MTCYBP16-201ENST00000509187 1129 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC104619.4-201ENST00000510773 249 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 KRT19P6-201ENST00000510983 209 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC138832.1-201ENST00000522871 556 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC005832.3-201ENST00000537929 631 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC024224.1-201ENST00000538284 609 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AP005136.1-201ENST00000579765 429 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC127024.5-201ENST00000580085 462 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 MIR4999-201ENST00000585029 91 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 MIR5684-201ENST00000585074 65 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC068790.2-201ENST00000602601 557 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC122133.1-201ENST00000613964 233 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AL121890.2-201ENST00000617644 465 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAPGEF3O95398 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 AC010266.2-201ENST00000564741 3255 ntBASIC6.17□□□□□ -1.42
RAPGEF3O95398 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RAPGEF3O95398 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 RNU6-619P-201ENST00000365146 108 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AL592291.1-201ENST00000403830 352 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 HSPD1P21-201ENST00000436541 245 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 MTCYBP3-201ENST00000445588 1137 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC073387.1-201ENST00000453261 709 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC092754.2-201ENST00000463506 460 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 RPS29P2-201ENST00000479278 136 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 UBE2CP3-201ENST00000502715 450 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 RPS27AP18-201ENST00000515536 459 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 SCARNA14-201ENST00000516903 136 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC087808.1-201ENST00000520501 361 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 SULT1C2P2-201ENST00000562517 294 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC090751.1-201ENST00000566966 267 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 ISCA1P3-201ENST00000577104 373 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AL390838.2-201ENST00000602394 274 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC023813.4-201ENST00000607580 580 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AL122125.1-201ENST00000616999 600 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC015914.2-201ENST00000618167 288 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC073530.2-201ENST00000623987 261 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.16□□□□□ -1.42
RAPGEF3O95398 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 HSPA8P17-201ENST00000427029 1382 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 AC096656.1-201ENST00000623826 1364 ntBASIC6.16□□□□□ -1.42
RAPGEF3O95398 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAPGEF3O95398 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RAPGEF3O95398 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RAPGEF3O95398 Y_RNA.201-201ENST00000364052 96 ntBASIC6.15□□□□□ -1.42
RAPGEF3O95398 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RAPGEF3O95398 AC007066.1-201ENST00000392902 381 ntBASIC6.15□□□□□ -1.42
RAPGEF3O95398 RNU2-65P-201ENST00000410162 185 ntBASIC6.15□□□□□ -1.42
RAPGEF3O95398 RNA5SP80-201ENST00000410475 111 ntBASIC6.15□□□□□ -1.42
RAPGEF3O95398 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.15□□□□□ -1.42
RAPGEF3O95398 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.15□□□□□ -1.42
RAPGEF3O95398 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.15□□□□□ -1.42
RAPGEF3O95398 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms