Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.39□□□□□ -1.87
SEMA3DO95025 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.39□□□□□ -1.87
SEMA3DO95025 HAUS1P3-201ENST00000523909 662 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 UBE2NP1-201ENST00000545592 458 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 DUXAP6-201ENST00000553858 601 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 CENPUP2-201ENST00000555897 1186 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.39□□□□□ -1.87
SEMA3DO95025 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC011492.1-201ENST00000600023 315 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 BNIP3P38-201ENST00000601117 544 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.39□□□□□ -1.87
SEMA3DO95025 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.39□□□□□ -1.87
SEMA3DO95025 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC073073.2-201ENST00000609827 2578 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC009501.3-201ENST00000605001 1352 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SEMA3DO95025 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SEMA3DO95025 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SEMA3DO95025 RNA5SP479-201ENST00000364858 117 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.38□□□□□ -1.87
SEMA3DO95025 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AL136116.1-201ENST00000403591 381 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 MTND4P22-201ENST00000413116 1169 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 LINC01881-201ENST00000416103 412 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AC068533.1-201ENST00000418542 415 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AL035423.1-201ENST00000420331 213 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 CYCSP4-201ENST00000429682 331 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 MTCO1P43-201ENST00000431831 488 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.38□□□□□ -1.87
SEMA3DO95025 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 RPL34P26-201ENST00000445636 354 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AL161747.1-201ENST00000480068 358 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 RPS4XP13-201ENST00000483219 789 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC110768.1-201ENST00000509222 400 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 RN7SKP18-201ENST00000516005 275 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 RN7SKP234-201ENST00000517173 224 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AC093227.2-201ENST00000589357 285 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.38□□□□□ -1.87
SEMA3DO95025 KATNBL1P1-201ENST00000605192 748 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.38□□□□□ -1.87
SEMA3DO95025 AL355802.4-201ENST00000607635 548 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 MIR7973-1-201ENST00000614683 76 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 CR392039.4-201ENST00000624968 501 ntBASIC3.38□□□□□ -1.87
SEMA3DO95025 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.38□□□□□ -1.87
SEMA3DO95025 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SEMA3DO95025 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SEMA3DO95025 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.37□□□□□ -1.87
SEMA3DO95025 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
SEMA3DO95025 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SEMA3DO95025 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SEMA3DO95025 SNORA70E-201ENST00000384492 135 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 CYCSP19-201ENST00000411715 316 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC004987.3-201ENST00000413879 771 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 MTND2P16-201ENST00000419987 799 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC006994.1-201ENST00000438212 839 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 XKRY2-201ENST00000442362 1093 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.37□□□□□ -1.87
SEMA3DO95025 TPMTP4-201ENST00000450749 678 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC073387.1-201ENST00000453261 709 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC007967.1-201ENST00000455422 1159 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC025459.1-201ENST00000504072 156 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.37□□□□□ -1.87
SEMA3DO95025 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
SEMA3DO95025 OR6C73P-201ENST00000546432 358 ntBASIC3.37□□□□□ -1.87
SEMA3DO95025 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.37□□□□□ -1.87
SEMA3DO95025 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.37□□□□□ -1.87
SEMA3DO95025 BNIP3P5-201ENST00000562290 498 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 649.7 ms