Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
LDB2O43679 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 Y_RNA.77-201ENST00000362962 107 ntBASIC4.3□□□□□ -1.72
LDB2O43679 RNU6-1066P-201ENST00000363573 105 ntBASIC4.3□□□□□ -1.72
LDB2O43679 RNU4-24P-201ENST00000364565 139 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AL139098.1-201ENST00000407291 389 ntBASIC4.3□□□□□ -1.72
LDB2O43679 RNU2-42P-201ENST00000410697 113 ntBASIC4.3□□□□□ -1.72
LDB2O43679 RNU6-272P-201ENST00000411028 104 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 RPL6P29-201ENST00000414863 865 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.3□□□□□ -1.72
LDB2O43679 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 RBMY1KP-201ENST00000423480 476 ntBASIC4.3□□□□□ -1.72
LDB2O43679 EIF1P3-201ENST00000423841 334 ntBASIC4.3□□□□□ -1.72
LDB2O43679 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AL035407.1-201ENST00000429211 571 ntBASIC4.3□□□□□ -1.72
LDB2O43679 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 AL512326.1-201ENST00000443050 721 ntBASIC4.3□□□□□ -1.72
LDB2O43679 RPL12P26-201ENST00000452430 487 ntBASIC4.3□□□□□ -1.72
LDB2O43679 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 CCDC75P1-201ENST00000469247 791 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC108145.1-201ENST00000503770 153 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC147055.4-201ENST00000504399 745 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AC005178.1-201ENST00000508392 440 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AP001189.2-201ENST00000527320 189 ntBASIC4.3□□□□□ -1.72
LDB2O43679 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 AL121834.1-201ENST00000572284 509 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.3□□□□□ -1.72
LDB2O43679 AC023575.1-201ENST00000580510 358 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 KPNA2P3-201ENST00000584190 848 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC115085.1-201ENST00000588924 229 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 AL031985.2-201ENST00000600955 480 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AC243654.2-201ENST00000612843 443 ntBASIC4.3□□□□□ -1.72
LDB2O43679 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.3□□□□□ -1.72
LDB2O43679 AL607023.1-201ENST00000620045 248 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.3□□□□□ -1.72
LDB2O43679 Z69908.1-201ENST00000622603 247 ntBASIC4.3□□□□□ -1.72
LDB2O43679 AL445363.3-201ENST00000623080 671 ntBASIC4.3□□□□□ -1.72
LDB2O43679 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.3□□□□□ -1.72
LDB2O43679 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
LDB2O43679 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LDB2O43679 MAPK10-349ENST00000641767 3661 ntBASIC4.3□□□□□ -1.72
LDB2O43679 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDB2O43679 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 RNU1-108P-201ENST00000362556 161 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RNU6-582P-201ENST00000362989 107 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RNA5SP509-201ENST00000364577 119 ntBASIC4.29□□□□□ -1.72
LDB2O43679 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 SNORD116-23-201ENST00000384645 92 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RNU6-1151P-201ENST00000384684 107 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RPS3AP26-201ENST00000398259 784 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AL133264.1-201ENST00000407157 562 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RNU2-65P-201ENST00000410162 185 ntBASIC4.29□□□□□ -1.72
LDB2O43679 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 TPT1P2-201ENST00000413105 503 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 RPS23P10-201ENST00000416185 486 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.29□□□□□ -1.72
LDB2O43679 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.29□□□□□ -1.72
LDB2O43679 EIF4A1P11-201ENST00000451239 222 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RPL23AP81-201ENST00000455252 467 ntBASIC4.29□□□□□ -1.72
LDB2O43679 RNU6-1218P-201ENST00000458990 108 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC109327.1-201ENST00000471666 403 ntBASIC4.29□□□□□ -1.72
LDB2O43679 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.29□□□□□ -1.72
LDB2O43679 UBA52P3-201ENST00000491303 382 ntBASIC4.29□□□□□ -1.72
LDB2O43679 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.29□□□□□ -1.72
LDB2O43679 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
LDB2O43679 AC092045.1-201ENST00000495716 1231 ntBASIC4.29□□□□□ -1.72
LDB2O43679 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms