Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC011477.5-201ENST00000586571 259 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 BNIP3P30-201ENST00000601184 574 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC067959.1-201ENST00000604334 379 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 AP001596.2-201ENST00000608410 312 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 AL021997.2-201ENST00000615674 271 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AL445567.2-201ENST00000618935 498 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC090229.1-201ENST00000590983 1609 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
SMAD6O43541 MFSD8-242ENST00000641690 4199 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMAD6O43541 EOGT-210ENST00000615922 1931 ntBASIC4.4□□□□□ -1.7
SMAD6O43541 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.7
SMAD6O43541 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SMAD6O43541 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMAD6O43541 MTCO1P18-201ENST00000455518 1419 ntBASIC4.4□□□□□ -1.7
SMAD6O43541 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMAD6O43541 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SMAD6O43541 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 RN7SKP44-201ENST00000363602 316 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 Y_RNA.192-201ENST00000363977 102 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 RNU6-532P-201ENST00000384318 107 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RNA5SP372-201ENST00000390836 115 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RNU6-757P-201ENST00000410334 100 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RNA5SP146-201ENST00000410743 123 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 CEACAMP8-201ENST00000413902 580 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 TAF13P2-201ENST00000416876 286 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 MTND1P23-201ENST00000416931 372 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.4□□□□□ -1.71
SMAD6O43541 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.4□□□□□ -1.71
SMAD6O43541 MTCO1P19-201ENST00000443487 500 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AL606662.1-201ENST00000445763 553 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC005008.1-201ENST00000456151 612 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.4□□□□□ -1.71
SMAD6O43541 RPS7P7-201ENST00000463499 571 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RPL30P6-201ENST00000475925 342 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC105137.1-201ENST00000484355 562 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RN7SL812P-201ENST00000493791 279 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.4□□□□□ -1.71
SMAD6O43541 AC084024.2-201ENST00000503480 791 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC025459.1-201ENST00000504072 156 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SMAD6O43541 AC022447.1-201ENST00000515358 464 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 RNA5SP49-201ENST00000516450 115 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 CYCSP28-201ENST00000534284 321 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.4□□□□□ -1.71
SMAD6O43541 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 ATP5J2P6-201ENST00000565203 266 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.4□□□□□ -1.71
SMAD6O43541 RPL23AP97-201ENST00000568955 471 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 MIR3611-201ENST00000584484 83 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 MIR6716-201ENST00000613413 80 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC025588.4-201ENST00000615802 908 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AC073569.3-201ENST00000619055 682 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 AL445363.3-201ENST00000623080 671 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 MIR3653-201ENST00000625572 110 ntBASIC4.4□□□□□ -1.71
SMAD6O43541 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.4□□□□□ -1.71
SMAD6O43541 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMAD6O43541 AL139811.1-201ENST00000424779 2299 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMAD6O43541 AC012020.1-201ENST00000624541 1728 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 RNU6-353P-201ENST00000364266 108 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 RNA5SP175-201ENST00000364275 119 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.39□□□□□ -1.71
SMAD6O43541 RNU1-44P-201ENST00000384453 163 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 Y_RNA.517-201ENST00000384551 106 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 RNA5SP239-201ENST00000410218 129 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL049610.1-201ENST00000423374 372 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL157831.1-201ENST00000426134 473 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL035458.1-201ENST00000433096 585 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.39□□□□□ -1.71
SMAD6O43541 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.39□□□□□ -1.71
SMAD6O43541 AL353572.1-201ENST00000442490 417 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.39□□□□□ -1.71
SMAD6O43541 RNU7-140P-201ENST00000459546 60 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 RPL5P13-201ENST00000462840 709 ntBASIC4.39□□□□□ -1.71
SMAD6O43541 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.39□□□□□ -1.71
SMAD6O43541 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms