Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RPL23AP89-201ENST00000439324 255 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL358794.1-201ENST00000445689 381 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.99□□□□□ -1.77
RTCAO00442 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 RPL7P52-201ENST00000449200 742 ntBASIC3.99□□□□□ -1.77
RTCAO00442 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.99□□□□□ -1.77
RTCAO00442 RNU7-170P-201ENST00000459303 61 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
RTCAO00442 BNIP3P41-201ENST00000503774 571 ntBASIC3.99□□□□□ -1.77
RTCAO00442 PRELID3BP6-201ENST00000503839 571 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.99□□□□□ -1.77
RTCAO00442 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 TPT1P8-201ENST00000510120 555 ntBASIC3.99□□□□□ -1.77
RTCAO00442 PARP4P3-201ENST00000510265 317 ntBASIC3.99□□□□□ -1.77
RTCAO00442 IGKV2-23-201ENST00000518729 323 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AP001207.2-201ENST00000519490 539 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.99□□□□□ -1.77
RTCAO00442 MED28P5-201ENST00000528254 438 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC006518.2-201ENST00000542513 940 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RTCAO00442 MIR3138-201ENST00000585238 82 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL163642.2-201ENST00000604722 1019 ntBASIC3.99□□□□□ -1.77
RTCAO00442 HSPE1P14-201ENST00000605812 302 ntBASIC3.99□□□□□ -1.77
RTCAO00442 MIR432-201ENST00000606207 94 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL445423.1-201ENST00000609941 536 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AL136295.6-201ENST00000610486 658 ntBASIC3.99□□□□□ -1.77
RTCAO00442 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 AC084824.4-201ENST00000620106 731 ntBASIC3.99□□□□□ -1.77
RTCAO00442 AC091046.2-201ENST00000620775 665 ntBASIC3.99□□□□□ -1.77
RTCAO00442 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 AC139713.2-210ENST00000641741 992 ntBASIC3.99□□□□□ -1.77
RTCAO00442 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.99□□□□□ -1.77
RTCAO00442 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
RTCAO00442 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.99□□□□□ -1.77
RTCAO00442 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
RTCAO00442 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTCAO00442 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.98□□□□□ -1.77
RTCAO00442 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 Z82217.1-201ENST00000625157 8149 ntBASIC3.98□□□□□ -1.77
RTCAO00442 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 RNU1-108P-201ENST00000362556 161 ntBASIC3.98□□□□□ -1.77
RTCAO00442 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
RTCAO00442 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 RN7SKP182-201ENST00000410772 298 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC092638.1-201ENST00000411966 1275 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 AC007390.1-201ENST00000415722 356 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AL391219.1-201ENST00000422570 483 ntBASIC3.98□□□□□ -1.77
RTCAO00442 MTCO1P54-201ENST00000430139 712 ntBASIC3.98□□□□□ -1.77
RTCAO00442 COX6B1P7-201ENST00000430845 235 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCAO00442 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 RPL6P9-201ENST00000466502 859 ntBASIC3.98□□□□□ -1.77
RTCAO00442 PRDX3P4-201ENST00000470828 747 ntBASIC3.98□□□□□ -1.77
RTCAO00442 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 RNU6-1028P-201ENST00000517164 93 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCAO00442 IFITM8P-201ENST00000522529 394 ntBASIC3.98□□□□□ -1.77
RTCAO00442 ARL2BPP5-201ENST00000523141 481 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC105233.3-201ENST00000531125 744 ntBASIC3.98□□□□□ -1.77
RTCAO00442 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.98□□□□□ -1.77
RTCAO00442 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCAO00442 AC063950.1-201ENST00000552036 308 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCAO00442 AC022655.2-201ENST00000577280 318 ntBASIC3.98□□□□□ -1.77
RTCAO00442 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC090330.1-201ENST00000588646 764 ntBASIC3.98□□□□□ -1.77
RTCAO00442 IPO5P1-202ENST00000600039 287 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 AC096947.1-201ENST00000603233 470 ntBASIC3.98□□□□□ -1.77
RTCAO00442 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.98□□□□□ -1.77
RTCAO00442 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCAO00442 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCAO00442 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
RTCAO00442 CYCSP41-201ENST00000616920 296 ntBASIC3.98□□□□□ -1.77
RTCAO00442 MIR6758-201ENST00000620653 63 ntBASIC3.98□□□□□ -1.77
RTCAO00442 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.98□□□□□ -1.77
RTCAO00442 AC124312.6-202ENST00000623624 418 ntBASIC3.98□□□□□ -1.77
RTCAO00442 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.98□□□□□ -1.77
RTCAO00442 AL121594.5-201ENST00000631724 573 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms