Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 VPS26AP1-201ENST00000483197 979 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC108145.1-201ENST00000503770 153 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AP001317.1-201ENST00000531194 960 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC093227.2-201ENST00000589357 285 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 VN1R83P-201ENST00000595685 445 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL138478.1-201ENST00000612252 832 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 OR1S1-201ENST00000624470 978 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AL512506.2-201ENST00000624472 458 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AC010608.2-201ENST00000624830 470 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 AP005901.5-201ENST00000545779 1796 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 RLIMP1-201ENST00000339626 1680 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 LINC02471-203ENST00000641941 4752 ntBASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA3F8WFD2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AL122126.1-201ENST00000546905 1318 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC011978.2-201ENST00000569835 2054 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RNU6-492P-201ENST00000363035 104 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 snoZ40.1-201ENST00000364540 72 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP513-201ENST00000364648 118 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MIR649-201ENST00000384843 97 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RNU11-4P-201ENST00000391149 133 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RNA5SP239-201ENST00000410218 129 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AL160275.2-201ENST00000412010 394 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MTND4P22-201ENST00000413116 1169 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 Z75741.2-201ENST00000417272 1167 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC005345.1-201ENST00000431868 217 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RPL21P103-201ENST00000479921 488 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RPS6P4-201ENST00000494693 758 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 PPBPP1-201ENST00000510807 373 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 IGHV3-32-201ENST00000519182 355 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC007424.1-203ENST00000554613 687 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MTND1P8-201ENST00000571424 950 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MIR3912-201ENST00000577566 105 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC015688.2-201ENST00000584523 262 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC022916.3-201ENST00000592961 742 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 LLPHP1-201ENST00000603571 367 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 RPP40P2-201ENST00000603596 712 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 MIR6875-201ENST00000617506 72 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AL121895.2-201ENST00000619558 447 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AF001550.2-201ENST00000636643 217 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC008013.2-202ENST00000637965 364 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC017104.4-201ENST00000636283 1592 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC011266.1-201ENST00000624119 3569 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 AC117529.2-201ENST00000512159 2068 ntBASIC3.79□□□□□ -1.8
NPIPA3F8WFD2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA3F8WFD2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA3F8WFD2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA3F8WFD2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA3F8WFD2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms