Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 RNU5B-4P-201ENST00000363508 111 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 RNU6-328P-201ENST00000390887 106 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MCTS2P-201ENST00000394552 546 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL355143.1-201ENST00000407101 841 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL024507.1-201ENST00000412741 274 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL009174.1-201ENST00000426577 416 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL138799.3-201ENST00000438968 350 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL590399.6-201ENST00000446396 307 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MTND2P39-201ENST00000457230 764 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 PRDX3P4-201ENST00000470828 747 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC092451.1-201ENST00000480211 153 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 RPS4XP15-201ENST00000489210 795 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 RPL5P23-201ENST00000496040 868 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC093801.2-201ENST00000503966 1050 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC004217.3-201ENST00000551552 878 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC010735.1-201ENST00000567305 1026 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MTCO1P40-201ENST00000574371 625 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MIR5685-201ENST00000579080 79 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL020997.3-201ENST00000602843 359 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC104662.1-201ENST00000604448 511 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC009948.4-201ENST00000604692 675 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL592436.1-201ENST00000605135 558 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MIR6868-201ENST00000611215 58 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AC006133.1-201ENST00000617106 264 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 AL359715.5-201ENST00000623431 443 ntBASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPIPA2E9PIF3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.65□□□□□ -1.82
NPIPA2E9PIF3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.65□□□□□ -1.82
NPIPA2E9PIF3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL355379.1-201ENST00000405542 640 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC069218.2-201ENST00000411665 344 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 RPS7P2-201ENST00000435134 607 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC234064.1-201ENST00000436312 247 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL050341.1-201ENST00000447743 313 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 HMGN2P21-201ENST00000447764 270 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC087879.1-201ENST00000474343 374 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 RNU7-143P-201ENST00000516781 65 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 MIR3158-1-201ENST00000583596 81 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC007687.1-201ENST00000602704 304 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 YWHAQP7-201ENST00000603536 658 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC007566.2-201ENST00000603642 413 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL451086.1-201ENST00000605596 223 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC099785.1-201ENST00000605697 437 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AL512427.1-201ENST00000618593 349 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC068620.4-201ENST00000636730 1182 ntBASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.65□□□□□ -1.83
NPIPA2E9PIF3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms