Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC007494.3-201ENST00000624660 743 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 ZNF962P-201ENST00000443465 3140 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC073429.2-201ENST00000569694 1444 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 AC011266.1-201ENST00000624119 3569 ntBASIC4.37□□□□□ -1.71
TCRBV7S3A2A0A539 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 CR381670.1-201ENST00000624291 1693 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RHOT1P2-201ENST00000366423 333 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 MIR93-201ENST00000385024 80 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RPL23AP29-201ENST00000397284 453 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 CYCSP45-201ENST00000402289 315 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RPS15AP38-201ENST00000413110 372 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL161631.1-201ENST00000417933 486 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 NIPA2P1-201ENST00000426223 976 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 VDAC1P6-201ENST00000430062 855 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 MTCO3P5-201ENST00000433620 714 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 MTCYBP39-201ENST00000437562 491 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RPL26P28-201ENST00000451325 435 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL513533.1-201ENST00000453728 415 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RN7SL812P-201ENST00000493791 279 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC108078.3-201ENST00000502633 489 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-583P-201ENST00000516012 92 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 SMARCE1P4-201ENST00000523647 241 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 OR4A12P-201ENST00000530847 918 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AP006289.1-201ENST00000538089 277 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC090502.2-201ENST00000549267 280 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC074029.1-201ENST00000552531 1044 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC011260.1-201ENST00000578420 472 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 SNORD39.3-201ENST00000584451 71 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC020914.6-201ENST00000594327 272 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 WISP1-OT1-201ENST00000602893 642 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC024560.3-201ENST00000608482 349 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL161616.1-201ENST00000611867 286 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 Z69908.1-201ENST00000622603 247 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AL445363.3-201ENST00000623080 671 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC117529.2-201ENST00000512159 2068 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 AC007529.1-201ENST00000418574 2178 ntBASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TCRBV7S3A2A0A539 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 MFSD8-216ENST00000641147 4009 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 OR5P1P-201ENST00000299512 925 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC079741.1-201ENST00000321498 212 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 SNRPEP3-201ENST00000338402 276 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 Y_RNA.18-201ENST00000362461 102 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNA5SP175-201ENST00000364275 119 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-1293P-201ENST00000384077 107 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-921P-201ENST00000384361 107 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-1122P-201ENST00000384449 107 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-441P-201ENST00000384545 106 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-178P-201ENST00000384631 104 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 RNU6-920P-201ENST00000410926 92 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 AC073264.1-201ENST00000411508 416 ntBASIC4.35□□□□□ -1.71
TCRBV7S3A2A0A539 USP9YP33-201ENST00000412220 421 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms