Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-310P-201ENST00000384655 107 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORD94-201ENST00000386037 137 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AL031985.1-201ENST00000392713 418 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU2-36P-201ENST00000410361 191 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 MCFD2P1-201ENST00000417812 300 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL7P46-201ENST00000425129 740 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC092651.1-201ENST00000426110 312 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 CBX3P6-201ENST00000430257 527 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC092162.1-201ENST00000432828 434 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL35AP22-201ENST00000436855 335 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC105402.2-201ENST00000438503 358 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC127537.2-201ENST00000439258 465 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AL445991.1-201ENST00000450381 475 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC018645.1-201ENST00000505003 109 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC008638.1-201ENST00000506035 866 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC010343.2-201ENST00000510162 224 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RNA5SP96-201ENST00000516041 107 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-189P-201ENST00000516120 101 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AP000676.2-201ENST00000529711 301 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC006512.2-201ENST00000543250 486 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 TPRX1P1-201ENST00000557620 319 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 MTCO3P23-201ENST00000561363 289 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC015819.1-201ENST00000613588 663 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC098657.3-201ENST00000620434 263 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AL136313.1-201ENST00000624804 202 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC135068.11-201ENST00000636378 921 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC007603.3-201ENST00000636915 979 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 BIN2P1-201ENST00000504996 1530 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 TPTE2P4-201ENST00000258589 1605 ntBASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHGA11Q9Y5H2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORD35A-201ENST00000363389 86 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.188-201ENST00000363952 111 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RNVU1-3-201ENST00000364313 161 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-61P-201ENST00000365528 109 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 SNORA24.1-201ENST00000384401 135 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 Y_RNA.576-201ENST00000384781 102 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 DBIP1-201ENST00000401435 260 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL391417.1-201ENST00000404100 426 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL033519.1-201ENST00000407266 307 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RNU6-847P-201ENST00000411115 108 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 MRPS21P5-201ENST00000417885 231 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC114482.1-201ENST00000418010 247 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 ATG3P1-201ENST00000419507 911 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL590609.2-201ENST00000421430 368 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL23AP38-201ENST00000423801 469 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 CALM2P2-201ENST00000428512 440 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RPL23AP89-201ENST00000439324 255 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 H2AFZP6-201ENST00000444403 394 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 Z95327.1-201ENST00000446082 482 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 EEF1A1P1-201ENST00000447052 739 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL596266.1-201ENST00000448132 400 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC022730.1-201ENST00000473114 568 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RN7SL502P-201ENST00000481857 290 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AC112484.3-201ENST00000505910 329 ntBASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDHGA11Q9Y5H2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms