Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC074029.4-201ENST00000624796 1859 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC108751.5-201ENST00000492880 1336 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC092447.7-201ENST00000422212 1621 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MFSD8-216ENST00000641147 4009 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL121657.1-201ENST00000327215 531 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-984P-201ENST00000363236 109 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 SNORD113.2-201ENST00000364166 89 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 SNORA4.1-201ENST00000364263 144 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-98P-201ENST00000384173 107 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 RNY3P10-201ENST00000384764 102 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 SNORA11C-201ENST00000408532 129 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 CTSL3P-202ENST00000412179 788 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 GAPDHP49-201ENST00000421421 961 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 CYCSP46-201ENST00000423569 204 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC092017.2-201ENST00000427600 362 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 NEK4P1-201ENST00000433383 879 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 RPL7AP61-201ENST00000443410 636 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 ST13P20-201ENST00000447996 1065 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC245028.2-201ENST00000458673 253 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-1225P-201ENST00000516336 65 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AP001207.1-201ENST00000524051 481 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AP003392.2-201ENST00000527269 208 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC127024.5-201ENST00000580085 462 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MIR5096-201ENST00000583713 70 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 VN1R84P-201ENST00000593697 235 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 BNIP3P30-201ENST00000601184 574 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC012360.2-201ENST00000609349 391 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AC026368.1-201ENST00000614934 690 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MIR7844-201ENST00000616161 122 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MAPK10-320ENST00000641462 6696 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CTDP1Q9Y5B0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL034370.1-201ENST00000397254 1590 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC093311.1-201ENST00000506586 2021 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RPL32P3-201ENST00000359025 275 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-621P-201ENST00000364752 109 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-867P-201ENST00000364956 107 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 SNORA70F-201ENST00000384142 135 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL050321.1-201ENST00000432363 400 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RPS25P9-201ENST00000435591 252 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RPL23AP35-201ENST00000451906 501 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 HMGB3P21-201ENST00000452483 547 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 RN7SL385P-201ENST00000468873 276 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 OR52A4P-201ENST00000472867 958 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC073073.1-201ENST00000493920 463 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC093281.2-201ENST00000510153 597 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC093249.4-201ENST00000564755 259 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 MTCO3P24-201ENST00000572729 782 ntBASIC5.47□□□□□ -1.53
CTDP1Q9Y5B0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms