Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF6Q9Y252 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 RN7SKP44-201ENST00000363602 316 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 RNU6-354P-201ENST00000383862 107 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 RNU6-610P-201ENST00000384264 107 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 MIR1183-201ENST00000408856 89 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 HSPE1P12-201ENST00000412576 301 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 FO393414.1-201ENST00000428697 1184 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC018644.1-201ENST00000429934 551 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL445584.1-201ENST00000431451 330 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 RAB11AP1-201ENST00000442978 646 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 FABP3P2-201ENST00000453169 399 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC091564.1-201ENST00000464563 479 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC018635.1-201ENST00000468292 1030 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC021146.1-201ENST00000511202 716 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 PRELID3BP4-201ENST00000515476 571 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC007424.1-203ENST00000554613 687 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 CYP2C60P-201ENST00000566088 139 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC107982.3-201ENST00000584957 985 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC024220.1-201ENST00000603675 484 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC120053.1-201ENST00000607706 736 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC121761.2-201ENST00000617300 689 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 MIR7151-201ENST00000617477 60 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC039056.2-201ENST00000622261 511 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 CR392039.5-201ENST00000623201 510 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF6Q9Y252 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF6Q9Y252 ZNF849P-201ENST00000594711 1566 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 AC025125.1-201ENST00000624743 1922 ntBASIC3.66□□□□□ -1.82
RNF6Q9Y252 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF6Q9Y252 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNF6Q9Y252 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.65□□□□□ -1.82
RNF6Q9Y252 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF6Q9Y252 SNORA63.3-201ENST00000362682 132 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 RNU6-356P-201ENST00000384140 107 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AL590704.1-201ENST00000402856 794 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 MIR1251-201ENST00000408552 70 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC092832.1-201ENST00000422934 400 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 OR5BE1P-201ENST00000425977 939 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 UBE2V1P6-201ENST00000430840 422 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 CKS1BP5-201ENST00000434172 273 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 PPIAP3-201ENST00000450588 505 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 PTGES3P3-201ENST00000511479 482 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC093755.1-201ENST00000512950 1023 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 RNU6-416P-201ENST00000516265 103 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 SOD1P3-201ENST00000518682 454 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC104115.2-201ENST00000523026 687 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC124293.1-201ENST00000530034 493 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF6Q9Y252 CENPUP2-201ENST00000555897 1186 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 NIFKP8-201ENST00000560500 874 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC244505.7-201ENST00000599675 272 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 BNIP3P19-201ENST00000605397 577 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 AC006065.5-201ENST00000623427 349 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 OR5BE1P-202ENST00000641168 1176 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF6Q9Y252 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF6Q9Y252 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
RNF6Q9Y252 CR381670.1-201ENST00000624291 1693 ntBASIC3.65□□□□□ -1.83
RNF6Q9Y252 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF6Q9Y252 AC025263.3-201ENST00000622965 1396 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms