Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AL035404.1-201ENST00000497982 568 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 RNU6-1129P-201ENST00000515964 104 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 Y_RNA.688-201ENST00000516565 95 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AP000926.4-201ENST00000527351 454 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC022882.1-201ENST00000532142 501 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 VN1R88P-201ENST00000596787 292 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 MRPS35P3-201ENST00000603189 709 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC012603.1-201ENST00000606424 528 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC080013.3-201ENST00000606839 578 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC099676.1-201ENST00000608886 657 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 MIR6500-201ENST00000622700 86 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AL157770.1-201ENST00000623049 439 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC015726.3-201ENST00000624501 418 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC092608.3-201ENST00000625017 386 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.3□□□□□ -1.72
SIX4Q9UIU6 AC009313.2-201ENST00000417893 1941 ntBASIC4.3□□□□□ -1.72
SIX4Q9UIU6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 Z82217.1-201ENST00000625157 8149 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC091046.3-201ENST00000631455 1574 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL356967.1-201ENST00000406305 431 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 PTP4A1P5-201ENST00000420305 455 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC104978.1-201ENST00000449387 391 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL133217.1-201ENST00000450980 425 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL672167.3-201ENST00000465951 960 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 BET1P1-201ENST00000482276 359 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC082651.2-201ENST00000496833 166 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MRPS33P3-201ENST00000513456 322 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC087373.1-201ENST00000524920 491 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 PDCL2P2-201ENST00000533651 189 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC091516.1-201ENST00000549191 703 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MIR4666A-201ENST00000580160 79 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 VN1R85P-201ENST00000601587 426 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL109653.1-201ENST00000603091 248 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC123786.2-201ENST00000603459 275 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC080013.6-201ENST00000606185 215 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AL450489.1-201ENST00000612071 468 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MIR6875-201ENST00000617506 72 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC007490.1-201ENST00000624321 703 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MIR3974-201ENST00000637126 96 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 FAM91A3P-201ENST00000456826 2544 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AC022893.2-201ENST00000564832 3296 ntBASIC4.29□□□□□ -1.72
SIX4Q9UIU6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SIX4Q9UIU6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX4Q9UIU6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms