Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC006518.1-201ENST00000541449 943 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 CCDC58P3-201ENST00000590792 430 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 BNIP3P22-201ENST00000593399 556 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC018618.2-201ENST00000604770 446 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 KATNBL1P5-201ENST00000605015 517 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AL450270.1-201ENST00000606160 391 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AL021368.1-201ENST00000607490 540 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AC069200.1-201ENST00000609511 323 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 AL391261.4-201ENST00000616012 481 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 USP8P1-201ENST00000494673 3183 ntBASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP2Q9UDT6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 ATP5A1P2-201ENST00000412323 255 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC068533.1-201ENST00000418542 415 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 RPL7P29-201ENST00000437151 728 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 TVP23BP2-201ENST00000455082 615 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 TMED11P-201ENST00000479478 690 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC104687.1-201ENST00000485829 412 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 RPL7P47-201ENST00000497299 556 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 HMGN1P15-201ENST00000513870 295 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CIR1P1-201ENST00000524055 1133 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC010591.1-201ENST00000603941 649 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AL163642.2-201ENST00000604722 1019 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AL158211.2-201ENST00000607282 395 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AP000240.1-201ENST00000609910 452 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 U6.48-201ENST00000618523 106 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 AC007823.1-201ENST00000569932 1566 ntBASIC4.31□□□□□ -1.72
CLIP2Q9UDT6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RNA5SP167-201ENST00000365461 116 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RNU6-98P-201ENST00000384173 107 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 MIR7-3-201ENST00000384898 110 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RNU6-328P-201ENST00000390887 106 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AL391417.1-201ENST00000404100 426 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RPL31P45-201ENST00000419532 356 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC002075.2-201ENST00000425207 252 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC069540.1-201ENST00000446320 988 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RNU7-170P-201ENST00000459303 61 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC005726.1-201ENST00000494679 427 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 Vault.1-201ENST00000516474 102 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 SOD1P3-201ENST00000518682 454 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 IGKV2-36-201ENST00000519999 223 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AP000619.3-201ENST00000535634 1127 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AL121766.1-201ENST00000547436 487 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 FRG1DP-201ENST00000635586 771 ntBASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP2Q9UDT6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms