Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC090877.1-201ENST00000561418 344 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 MTND3P13-201ENST00000574391 343 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 MIR4512-201ENST00000583257 77 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC015688.2-201ENST00000584523 262 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 GAS5-AS1-201ENST00000602767 694 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC022022.2-201ENST00000602989 360 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 PSMA6P4-201ENST00000603247 718 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC010857.1-201ENST00000606398 594 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC090948.1-201ENST00000607464 549 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC011330.2-201ENST00000621680 635 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AP000676.4-201ENST00000624659 623 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 ZNF663P-202ENST00000641770 1131 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC006042.3-201ENST00000454684 1469 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC005261.4-201ENST00000600047 1385 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RNU6-549P-201ENST00000384433 107 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 SNORA11C-201ENST00000408532 129 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RN7SKP285-201ENST00000410137 318 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RNU6-77P-201ENST00000410554 91 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 EEF1A1P39-201ENST00000440791 250 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 CR769776.1-201ENST00000441254 787 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL162151.2-201ENST00000448875 158 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 NPM1P13-201ENST00000452663 865 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 NAP1L1P3-201ENST00000462291 880 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RNU6-416P-201ENST00000516265 103 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 IGLVIV-65-201ENST00000517313 360 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 IGKV2-36-201ENST00000519999 223 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 BRD9P1-201ENST00000529855 560 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 DEFB130C-202ENST00000530001 230 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 CCDC58P3-201ENST00000590792 430 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC113368.1-201ENST00000603736 382 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 Z99289.3-201ENST00000605586 594 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AP000238.1-201ENST00000608759 426 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 RMST_8.1-201ENST00000610287 165 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AC139769.3-201ENST00000618383 175 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AL355493.4-201ENST00000618530 292 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 AP002791.1-201ENST00000623291 381 ntBASIC3.78□□□□□ -1.8
NDE1Q9NXR1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDE1Q9NXR1 NSRP1P1-201ENST00000444067 1693 ntBASIC3.78□□□□□ -1.81
NDE1Q9NXR1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RNU4-51P-201ENST00000364206 140 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RNU6-304P-201ENST00000364855 107 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RNU6-636P-201ENST00000384598 107 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL109941.1-201ENST00000401925 229 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL391417.1-201ENST00000404100 426 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 RBMY2KP-201ENST00000418221 992 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AL589880.1-201ENST00000448271 287 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 MTND1P31-201ENST00000449206 961 ntBASIC3.77□□□□□ -1.81
NDE1Q9NXR1 AC112492.1-201ENST00000449607 712 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms