Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTND4P26-201ENST00000415971 1359 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 MTND4P5-201ENST00000435821 1374 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC134882.1-201ENST00000603738 1676 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC021146.4-201ENST00000309229 279 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL590240.1-201ENST00000334118 313 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TMSB4XP8-201ENST00000402089 135 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 HDGFP1-201ENST00000405943 252 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 ELOCP19-201ENST00000411919 318 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TMSB4XP6-201ENST00000415187 135 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 FCF1P2-201ENST00000415284 583 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 RAD23BP1-201ENST00000421404 1227 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TMSB4XP1-201ENST00000424567 135 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 DLGAP5P1-201ENST00000430307 464 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL513175.1-201ENST00000431492 780 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 RPL7P1-201ENST00000468161 747 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 RPL7P9-201ENST00000468715 747 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 OR52A4P-201ENST00000472867 958 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC104763.1-201ENST00000475274 360 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL024509.2-201ENST00000493462 493 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC113430.1-201ENST00000506872 718 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 MTCO2P32-201ENST00000514865 403 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC090151.1-201ENST00000520784 730 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AP001207.1-201ENST00000524051 481 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AP001189.2-201ENST00000527320 189 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC092851.1-201ENST00000535964 478 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AL121766.1-201ENST00000547436 487 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC007954.1-201ENST00000554198 494 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC090181.2-201ENST00000602975 672 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC098679.5-201ENST00000624394 571 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 OR2L1P-202ENST00000641567 1023 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 MAPK10-303ENST00000641324 3959 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 AC010928.1-201ENST00000592477 1447 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.68□□□□□ -1.66
USP29Q9HBJ7 SCN1A-220ENST00000641603 12506 ntBASIC4.68□□□□□ -1.66
USP29Q9HBJ7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 RPL32P3-201ENST00000359025 275 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 RNU6-492P-201ENST00000363035 104 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 SNORA4.1-201ENST00000364263 144 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AC068538.1-201ENST00000376856 336 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 MT-TH-201ENST00000387441 69 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 SNORA68.2-201ENST00000391263 128 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 SNORA26.8-201ENST00000391306 124 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 ATP5F1P4-201ENST00000397288 746 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AL136133.1-201ENST00000413694 376 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 RPL23AP1-201ENST00000428990 471 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AL450263.2-201ENST00000439400 589 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 NF1P3-201ENST00000457709 450 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 AC090013.1-201ENST00000485147 480 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.67□□□□□ -1.66
USP29Q9HBJ7 MTCO3P7-201ENST00000510008 774 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.67□□□□□ -1.66
USP29Q9HBJ7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms