Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OR4A45P-201ENST00000529954 901 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AL121932.1-201ENST00000605542 214 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AC087752.4-201ENST00000605911 462 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AL008729.2-201ENST00000606393 473 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AC080013.4-201ENST00000607624 649 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 SAGE2P-201ENST00000420011 2126 ntBASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM54Q9BYV2 AL136164.3-201ENST00000624429 3978 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC092104.1-201ENST00000497346 1441 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC016769.3-201ENST00000396562 315 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 ARF4P3-201ENST00000397387 509 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC114755.2-201ENST00000413520 361 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 RPL23AP27-201ENST00000415161 451 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 RPS15AP40-201ENST00000419621 391 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 RGS17P1-201ENST00000423358 553 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL627308.1-201ENST00000435693 821 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC004938.1-201ENST00000438468 308 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 UBE2V1P3-201ENST00000439651 417 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 DNAJC19P1-201ENST00000455312 319 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 CFTRP1-201ENST00000456646 183 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 RNA5SP269-201ENST00000459032 137 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 snoU13.20-201ENST00000459180 104 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 BX284632.1-201ENST00000478218 541 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 CBX3P3-201ENST00000508108 532 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC022447.1-201ENST00000515358 464 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 HSPA8P13-201ENST00000523715 472 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AP003033.1-201ENST00000527244 415 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL049839.1-201ENST00000556151 657 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC012414.6-201ENST00000568241 401 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 LARP7P2-201ENST00000575306 125 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AP005119.2-201ENST00000579735 1105 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC083760.1-201ENST00000589621 670 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 BNIP3P23-201ENST00000599655 511 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC087763.1-201ENST00000603391 286 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC112187.2-201ENST00000604345 283 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC005084.1-201ENST00000605160 304 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC104073.3-201ENST00000610942 955 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC013562.2-201ENST00000611632 603 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL512624.1-201ENST00000613638 469 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL356121.2-201ENST00000624715 780 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 FAM157B-203ENST00000639350 358 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AC130650.2-201ENST00000618736 2403 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 AL592148.3-201ENST00000608771 2646 ntBASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM54Q9BYV2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 U3.35-201ENST00000408405 208 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AL663109.1-201ENST00000411498 844 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 RPL17P12-201ENST00000413391 526 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 AC109780.2-201ENST00000413467 845 ntBASIC4.73□□□□□ -1.65
TRIM54Q9BYV2 CHEK2P3-201ENST00000416118 248 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms