Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CDH12P1-201ENST00000518435 295 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 IGJP1-201ENST00000522682 475 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC004217.3-201ENST00000551552 878 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC011611.5-201ENST00000552477 578 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AGGF1P8-201ENST00000562979 1000 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 MTCO1P40-201ENST00000574371 625 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC053481.2-202ENST00000582394 1500 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC090312.2-201ENST00000582687 378 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC008507.2-201ENST00000588402 1176 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC006116.7-201ENST00000590141 756 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC068620.3-201ENST00000602749 560 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 BNIP3P31-201ENST00000604515 566 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AL034351.1-201ENST00000605288 668 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC113194.1-201ENST00000606037 500 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC005156.1-201ENST00000613371 573 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 U7.8-201ENST00000619968 63 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 RNU6-156P-201ENST00000621869 107 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 AP000553.6-201ENST00000641242 118 ntBASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HDHD3Q9BSH5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 MTCO1P14-201ENST00000441695 1559 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RPL32P3-201ENST00000359025 275 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RNU5B-1-201ENST00000363286 116 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 MIR937-201ENST00000401271 86 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 HNRNPDP2-201ENST00000406475 478 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC092638.1-201ENST00000411966 1275 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 UBE2V1P9-201ENST00000414760 368 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RPL7P53-201ENST00000421245 739 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 OR8F1P-201ENST00000425243 930 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 OR4F13P-201ENST00000428478 931 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL158071.1-201ENST00000430315 461 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ARF4P4-201ENST00000439608 520 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 UBE2V1P5-201ENST00000440070 405 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 BX248409.1-201ENST00000455497 255 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RPL21P71-201ENST00000465598 459 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ACTG1P13-201ENST00000486987 1043 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC069306.1-201ENST00000507006 843 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 OR5H4P-201ENST00000510851 923 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC124293.1-201ENST00000530034 493 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC104072.1-201ENST00000568817 668 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC087499.8-201ENST00000578406 226 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 MIR4458-201ENST00000578872 75 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC005255.1-201ENST00000593748 216 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC011492.1-201ENST00000600023 315 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC083899.3-201ENST00000603413 594 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC115621.1-201ENST00000604653 858 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC023043.4-201ENST00000612081 449 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC008121.2-201ENST00000614647 523 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AL590396.2-201ENST00000636511 1041 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC006927.2-201ENST00000639256 389 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 AC046144.1-201ENST00000478559 1853 ntBASIC3.05□□□□□ -1.92
HDHD3Q9BSH5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 RNU6-619P-201ENST00000365146 108 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 RNA5SP283-201ENST00000365604 119 ntBASIC3.04□□□□□ -1.92
HDHD3Q9BSH5 SNORA56-201ENST00000383966 129 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms