Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP004607.9-201ENST00000618202 316 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC087385.3-201ENST00000620477 187 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC002550.2-201ENST00000621246 394 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC107027.3-201ENST00000565095 3473 ntBASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDK5RAP1Q96SZ6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC010132.2-201ENST00000295493 1043 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RNY4P14-201ENST00000363656 96 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RNU6-534P-201ENST00000364877 106 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.326-201ENST00000365176 113 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS3AP36-201ENST00000398190 775 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 U3.32-201ENST00000408116 212 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RBMY2KP-201ENST00000418221 992 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 BTF3P9-201ENST00000418784 283 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 MTND2P23-201ENST00000422990 651 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 ZYG11AP1-201ENST00000430329 837 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104850.1-201ENST00000435940 476 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AL451074.3-201ENST00000437709 472 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC012512.1-201ENST00000446594 718 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 MTCO2P25-201ENST00000447065 681 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 PSPHP1-201ENST00000450062 261 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 NIPA2P5-201ENST00000452282 464 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC091685.2-201ENST00000454924 864 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 OR52A4P-201ENST00000472867 958 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL23AP37-201ENST00000479658 549 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC083982.1-201ENST00000485679 344 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC018710.1-201ENST00000506509 158 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 BTF3P13-201ENST00000513224 490 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC125611.2-201ENST00000551907 647 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC009117.1-201ENST00000563948 554 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 ATP5F1P7-201ENST00000567330 760 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC060780.3-201ENST00000589464 80 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC233280.2-201ENST00000603917 1070 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 Mico1.1-201ENST00000611698 204 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 AC027807.2-201ENST00000616099 408 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CDK5RAP1Q96SZ6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP1Q96SZ6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP1Q96SZ6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDK5RAP1Q96SZ6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 OR4K15-201ENST00000305051 1216 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-543P-201ENST00000362576 108 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 RNA5SP87-201ENST00000384155 118 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 SNORA40.3-201ENST00000390964 122 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AL356776.1-201ENST00000406574 447 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC093414.1-201ENST00000434712 514 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC093019.1-201ENST00000443135 252 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL7P36-201ENST00000444633 681 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC239367.2-201ENST00000447309 705 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AL691482.1-201ENST00000453255 87 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL35AP28-201ENST00000459730 331 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC019235.1-201ENST00000503847 207 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.15□□□□□ -1.59
CDK5RAP1Q96SZ6 AC021678.1-201ENST00000505195 936 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms