Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC114755.2-201ENST00000413520 361 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC062016.2-201ENST00000420950 676 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC233981.1-201ENST00000423224 461 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 RGS17P1-201ENST00000423358 553 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC092162.1-201ENST00000432828 434 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL138878.2-201ENST00000440581 1241 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL450023.3-201ENST00000440592 271 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 MRPL48P1-201ENST00000445390 636 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 TCEA1P1-201ENST00000449716 880 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 SLC31A1P1-201ENST00000451221 567 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC133473.1-201ENST00000455173 299 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC091965.2-201ENST00000512324 613 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 Y_RNA.695-201ENST00000516715 107 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AP000790.1-201ENST00000528891 737 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 OR5M2P-201ENST00000529003 936 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 UBE2FP2-201ENST00000566646 462 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC012213.3-201ENST00000577199 777 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 U73023.1-201ENST00000603134 700 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC069304.2-201ENST00000605154 435 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC013562.2-201ENST00000611632 603 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL161616.1-201ENST00000611867 286 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL049794.2-201ENST00000616301 365 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC087385.3-201ENST00000620477 187 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 AC099063.3-201ENST00000642066 185 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 IRF5P1-201ENST00000504852 2164 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS50Q96JG6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 MTND4P5-201ENST00000435821 1374 ntBASIC4.65□□□□□ -1.67
VPS50Q96JG6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
VPS50Q96JG6 MFSD8-242ENST00000641690 4199 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL031119.1-201ENST00000404707 1879 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 Y_RNA.18-201ENST00000362461 102 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 RNA5SP502-201ENST00000362694 119 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 RNU4-21P-201ENST00000362802 126 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 RNU6-216P-201ENST00000363282 104 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 U3.4-201ENST00000363352 213 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 MIR192-201ENST00000384915 110 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AF186996.5-201ENST00000418098 904 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL049610.1-201ENST00000423374 372 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 LARP1BP3-201ENST00000437229 869 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 RPL7P11-201ENST00000437586 658 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC241584.1-201ENST00000438469 1241 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 RN7SL517P-201ENST00000462240 305 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC013828.1-201ENST00000481845 158 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC108078.3-201ENST00000502633 489 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 MTND4P2-201ENST00000507767 1203 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC090502.2-201ENST00000549267 280 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 SERPINE4P-201ENST00000554978 281 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 PSMB7P1-201ENST00000556349 514 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC087477.6-201ENST00000559595 843 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 SNORD39.3-201ENST00000584451 71 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 MTCYBP22-201ENST00000603788 447 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL391358.1-201ENST00000605342 190 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 HSPE1P14-201ENST00000605812 302 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL031775.1-201ENST00000607014 887 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AP001521.1-201ENST00000609150 300 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms