Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RPL7P29-201ENST00000437151 728 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 MTCO3P18-201ENST00000440206 761 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 MTCO1P48-201ENST00000448024 1096 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC000111.2-201ENST00000448200 210 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL354710.1-201ENST00000453641 246 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AMD1P1-201ENST00000457220 922 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 ARPC3P2-201ENST00000457786 533 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC006967.1-201ENST00000467608 589 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL121769.1-201ENST00000469473 401 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 RPL23AP72-201ENST00000492447 435 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 RN7SKP46-201ENST00000515942 234 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 RN7SKP298-201ENST00000515950 94 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 RNA5SP392-201ENST00000516905 112 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 DEFB108A-201ENST00000530110 222 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC008745.1-201ENST00000604064 271 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC112230.1-201ENST00000604342 547 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AL391358.1-201ENST00000605342 190 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 RNU4-89P-201ENST00000607443 133 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC098614.4-201ENST00000607601 462 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 MIR6780A-201ENST00000615089 68 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC007742.2-201ENST00000618226 398 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 DUXAP9-208ENST00000622815 614 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
DDX11Q96FC9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DDX11Q96FC9 A2MP1-204ENST00000566278 4130 ntBASIC5.72□□□□□ -1.49
DDX11Q96FC9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DDX11Q96FC9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
DDX11Q96FC9 AL672167.1-203ENST00000641299 2975 ntBASIC5.71□□□□□ -1.49
DDX11Q96FC9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 RNU6-1339P-201ENST00000363574 91 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 UBBP2-201ENST00000376781 231 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 MIR525-201ENST00000384978 85 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 NCSTNP1-201ENST00000406229 144 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC068533.2-201ENST00000411872 306 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 HMGN1P14-201ENST00000412459 517 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 RGS17P1-201ENST00000423358 553 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL009174.1-201ENST00000426577 416 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 B3GNT2P1-201ENST00000434960 952 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL512286.1-201ENST00000439244 400 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 MTND4LP16-201ENST00000440828 295 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC104306.1-201ENST00000449702 371 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 RPS4XP15-201ENST00000489210 795 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC108471.1-201ENST00000513977 287 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC022884.3-201ENST00000579571 248 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AL512782.1-201ENST00000603093 364 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC020910.3-201ENST00000603701 874 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC133552.5-201ENST00000604266 540 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 MIR378J-201ENST00000611988 109 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms