Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 AL161729.3-201ENST00000603533 673 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 AC009948.4-201ENST00000604692 675 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 AL161616.1-201ENST00000611867 286 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 RNU6-1192P-201ENST00000612197 107 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 RNU6-489P-201ENST00000618289 107 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 PLCE1P1-201ENST00000622094 305 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 AC013437.2-201ENST00000639587 677 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 OR5BE1P-202ENST00000641168 1176 ntBASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC71LQ8N9Z2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 MTCO1P6-201ENST00000481192 1384 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 FAM91A3P-201ENST00000456826 2544 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AP002001.2-201ENST00000529025 1469 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 PTP4A1P7-201ENST00000423476 514 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 OR51AB1P-201ENST00000429046 620 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RPS29P17-201ENST00000430795 166 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 SKP1P1-201ENST00000438081 489 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC083863.1-201ENST00000438811 231 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RPS17P13-201ENST00000448974 407 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 BX276092.4-201ENST00000452056 248 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RPS15AP1-201ENST00000457423 391 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RPL23AP24-201ENST00000458203 385 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 snoU13.1-201ENST00000459157 104 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RN7SL610P-201ENST00000463845 291 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RN7SL860P-201ENST00000473738 223 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AP000893.1-201ENST00000474462 794 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC091959.2-201ENST00000477363 321 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 MTATP6P9-201ENST00000515039 680 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 RNU4-60P-201ENST00000517239 135 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 SUMO2P20-201ENST00000520803 283 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC091516.1-201ENST00000549191 703 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC017100.2-201ENST00000584628 355 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC092653.1-201ENST00000608509 531 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 FAM25E-202ENST00000608562 189 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 MIR6730-201ENST00000622213 67 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 AC107081.3-201ENST00000612715 2034 ntBASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC71LQ8N9Z2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 RNA5SP295-201ENST00000362655 121 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 SNORA11B-201ENST00000408175 129 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 HSPE1P12-201ENST00000412576 301 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 AC011933.1-201ENST00000413334 321 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 RPL21P109-201ENST00000422213 475 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 RPL23AP1-201ENST00000428990 471 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.24□□□□□ -1.89
CCDC71LQ8N9Z2 BTF3P10-201ENST00000433415 495 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms