Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 HIGD1AP10-201ENST00000527837 282 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC092851.1-201ENST00000535964 478 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 PDCD5P1-201ENST00000543528 309 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 DEFB131E-202ENST00000602581 683 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 BPIFA4P-203ENST00000603168 689 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL133338.2-201ENST00000604292 736 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL390816.3-201ENST00000604527 1066 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC010201.1-201ENST00000605051 540 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC006270.3-201ENST00000605967 1036 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL139286.2-201ENST00000606838 396 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC004948.1-201ENST00000609858 672 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 BX323046.1-201ENST00000610145 535 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL359715.5-201ENST00000623431 443 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC090582.1-201ENST00000636321 199 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 OR2L1P-202ENST00000641567 1023 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 LINC00622-201ENST00000562811 1570 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC027290.2-201ENST00000623210 18662 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RNU5D-1-201ENST00000363299 116 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RNU6-1066P-201ENST00000363573 105 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 SNORA71.2-201ENST00000364941 134 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RN7SKP106-201ENST00000410832 272 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPS15AP38-201ENST00000413110 372 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL450992.3-201ENST00000413192 568 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL391219.1-201ENST00000422570 483 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPS3AP44-201ENST00000425466 790 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 MTCO3P30-201ENST00000426425 670 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPL23AP25-201ENST00000430973 463 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPL23AP43-201ENST00000446445 471 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL034418.1-201ENST00000448675 860 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC012671.1-201ENST00000451912 203 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 DDX39BP2-208ENST00000453923 258 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC104689.1-201ENST00000473356 768 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC015724.1-201ENST00000478577 156 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPS27P23-201ENST00000487608 251 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 SETP14-201ENST00000497538 873 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC011352.3-201ENST00000505162 593 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC008694.2-201ENST00000517591 306 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 COX6B1P6-201ENST00000522347 255 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC006362.1-201ENST00000567392 174 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC007599.1-201ENST00000568688 1174 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 ROCK1P1-201ENST00000573767 549 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AP001094.1-201ENST00000579805 193 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 NTAN1P1-201ENST00000603150 646 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC078899.5-201ENST00000612475 178 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AC092656.1-203ENST00000624134 423 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 PCMTD1P7-201ENST00000634506 357 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 AL392088.2-201ENST00000637607 285 ntBASIC4.14□□□□□ -1.75
CLIP4Q8N3C7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms