Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL590704.1-201ENST00000402856 794 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 HNRNPDP2-201ENST00000406475 478 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC096533.1-201ENST00000411645 353 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC092638.1-201ENST00000411966 1275 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 TAF13P2-201ENST00000416876 286 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL354692.1-201ENST00000423044 315 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 PTP4A1P7-201ENST00000423476 514 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 RPL37P1-201ENST00000432310 284 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 RPL21P110-201ENST00000433345 446 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CDC27P1-201ENST00000445384 715 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 FCF1P6-201ENST00000456841 595 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 RNU7-140P-201ENST00000459546 60 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC015724.1-201ENST00000478577 156 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC069499.1-201ENST00000489433 509 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC008427.1-201ENST00000503102 655 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC069306.1-201ENST00000507006 843 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 IGJP1-201ENST00000522682 475 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 VN1R87P-201ENST00000596706 487 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AP002802.2-201ENST00000605877 235 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 MIR486-1-201ENST00000612171 68 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-1192P-201ENST00000612197 107 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-489P-201ENST00000618289 107 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 U7.8-201ENST00000619968 63 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL356863.1-201ENST00000623378 1080 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AL121594.5-201ENST00000631724 573 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC139713.2-210ENST00000641741 992 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AC007529.1-201ENST00000418574 2178 ntBASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf40Q8IXQ3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MAPK10-373ENST00000641983 6772 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC008725.1-201ENST00000605123 2263 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 RNA5SP124-201ENST00000362739 110 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MIR554-201ENST00000384874 96 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL603865.2-201ENST00000401679 213 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 Z98941.1-201ENST00000407764 100 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 TCEA1P2-201ENST00000420496 906 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 RPL30P3-201ENST00000424262 333 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC008885.2-201ENST00000509506 930 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 RPL7L1P13-201ENST00000511702 739 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC023632.4-201ENST00000517783 191 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MTCO1P49-201ENST00000523429 802 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC034105.4-201ENST00000568304 277 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MTCO1P40-201ENST00000574371 625 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 MIR5187-201ENST00000583479 76 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC009948.4-201ENST00000604692 675 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC097504.2-201ENST00000608088 454 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC022306.3-201ENST00000619930 550 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AL356118.1-201ENST00000635272 1078 ntBASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms