Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC004057.1-201ENST00000485827 348 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 HMGB3P18-201ENST00000406327 590 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 RN7SKP223-201ENST00000410582 62 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 RNA5SP21-201ENST00000410917 96 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 AC245517.4-201ENST00000448601 281 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 RPL23AP73-201ENST00000492507 471 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 AC112184.1-201ENST00000505179 312 ntBASIC2.42□□□□□ -2.02
VPS13CQ709C8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
VPS13CQ709C8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS13CQ709C8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 HMGN2P8-201ENST00000391458 268 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 uc_338.32-201ENST00000615087 172 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC104446.1-201ENST00000613728 1321 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC017071.1-201ENST00000564407 2204 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC018529.3-201ENST00000624212 2254 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL358913.1-201ENST00000554342 121 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL049555.1-201ENST00000562834 1933 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 LSM1P2-201ENST00000604911 322 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC026790.2-201ENST00000606282 430 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC138627.1-204ENST00000641894 765 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 RNA5SP31-201ENST00000411144 127 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 MRPS31P2-201ENST00000451581 518 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL392112.1-201ENST00000605115 829 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL365400.2-201ENST00000605604 902 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS13CQ709C8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 AC000123.3-201ENST00000624029 4975 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 HSPA8P4-201ENST00000511877 1920 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 NCAPGP1-201ENST00000505112 1814 ntBASIC2.41□□□□□ -2.02
VPS13CQ709C8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS13CQ709C8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.4□□□□□ -2.02
VPS13CQ709C8 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 RAP1BP1-201ENST00000412709 553 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13CQ709C8 DUTP6-201ENST00000425573 462 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.4□□□□□ -2.02
VPS13CQ709C8 AC107016.2-201ENST00000547968 190 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.4□□□□□ -2.02
VPS13CQ709C8 AC103710.3-201ENST00000608157 948 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 AL669942.2-201ENST00000620352 697 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 AC009039.2-201ENST00000624524 529 ntBASIC2.4□□□□□ -2.02
VPS13CQ709C8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13CQ709C8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13CQ709C8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
VPS13CQ709C8 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
VPS13CQ709C8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 AP002088.1-201ENST00000382740 395 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13CQ709C8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13CQ709C8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13CQ709C8 AC018555.1-201ENST00000567548 1980 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS13CQ709C8 MIR764-201ENST00000390811 85 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 RNA5SP184-201ENST00000411071 108 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 RPS27AP9-201ENST00000477681 438 ntBASIC2.4□□□□□ -2.03
VPS13CQ709C8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.4□□□□□ -2.03
VPS13CQ709C8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms