Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC008759.3-201ENST00000613300 508 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 MIR6810-201ENST00000622701 70 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AP000943.4-201ENST00000622912 357 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 LINC00561-201ENST00000565815 2738 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 AL359893.1-201ENST00000447628 1580 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RLIMP1-201ENST00000339626 1680 ntBASIC3.58□□□□□ -1.84
NIPAL3Q6P499 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
NIPAL3Q6P499 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RNU6-619P-201ENST00000365146 108 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 OR1L1-202ENST00000373686 1083 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 MT-TC-201ENST00000387405 66 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RPL21P65-201ENST00000406094 466 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RNA5SP317-201ENST00000410176 116 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RNA5SP311-201ENST00000411290 116 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 OR8G2P-201ENST00000412796 908 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 EI24P1-201ENST00000416584 867 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AL356095.1-201ENST00000417217 199 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC244098.2-201ENST00000422068 99 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AL691449.1-201ENST00000426570 421 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 B3GNT2P1-201ENST00000434960 952 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 HMGB1P37-201ENST00000439613 609 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC000041.1-201ENST00000439655 175 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC044797.1-201ENST00000445744 679 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RPS17P13-201ENST00000448974 407 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 ZNF37BP-203ENST00000452306 1352 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC092451.1-201ENST00000480211 153 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC110792.1-201ENST00000491826 472 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC118282.2-201ENST00000508739 374 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC095050.2-201ENST00000510748 1458 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC092593.2-201ENST00000513866 913 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RNA5SP315-201ENST00000516340 116 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 RNA5SP312-201ENST00000517068 116 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 IGKV2D-36-201ENST00000518643 226 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AP003355.1-201ENST00000518956 587 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 OR4A45P-201ENST00000529954 901 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC092451.2-201ENST00000538746 658 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 TOMM20P2-201ENST00000540082 421 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CYB5AP5-201ENST00000549779 389 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 BNIP3P19-201ENST00000605397 577 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 MIR6867-201ENST00000610636 67 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AC068722.2-201ENST00000618734 544 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 AL627171.1-201ENST00000618845 1308 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CASC19-261ENST00000641853 1638 ntBASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NIPAL3Q6P499 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 ZNF734P-201ENST00000419494 1534 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 SPRR2C-201ENST00000290702 219 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 OR6K3-202ENST00000368146 996 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 RNU6-921P-201ENST00000384361 107 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 MIR649-201ENST00000384843 97 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL121972.1-201ENST00000402023 252 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC009237.2-201ENST00000421358 284 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 ARL4AP4-201ENST00000434170 518 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 RPL7P28-201ENST00000437739 740 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AC083863.1-201ENST00000438811 231 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 RPS11P1-201ENST00000451072 473 ntBASIC3.56□□□□□ -1.84
NIPAL3Q6P499 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.56□□□□□ -1.84
NIPAL3Q6P499 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms