Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RPS3AP25-201ENST00000411660 793 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 RPL30P2-201ENST00000414021 291 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 MTND2P16-201ENST00000419987 799 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 RPL21P112-201ENST00000434403 463 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC005242.1-201ENST00000585658 438 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AC024220.1-201ENST00000603675 484 ntBASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.43□□□□□ -1.86
H3F3CQ6NXT2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 RNU6-328P-201ENST00000390887 106 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 PRRC2CP1-201ENST00000404428 159 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 HIGD1AP12-201ENST00000427832 281 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 HMGB1P45-201ENST00000435986 653 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 HSPD1P21-201ENST00000436541 245 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 RSL24D1P2-201ENST00000445584 366 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 MTCO3P16-201ENST00000454456 754 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC078785.3-201ENST00000476607 425 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC104619.4-201ENST00000510773 249 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 DUXAP2-201ENST00000519198 589 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 RANP9-201ENST00000519957 271 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC139103.1-201ENST00000534696 1030 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 YWHAQP7-201ENST00000603536 658 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC019176.2-201ENST00000611579 315 ntBASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
H3F3CQ6NXT2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 RAD1P1-201ENST00000231383 813 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 RNU6-40P-201ENST00000384254 107 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AC093578.1-201ENST00000415219 368 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 EI24P1-201ENST00000416584 867 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AC245054.1-201ENST00000420944 258 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AC017083.1-201ENST00000428093 483 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 YME1L1P1-201ENST00000429435 297 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 CYCSP4-201ENST00000429682 331 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 TMEM248P1-201ENST00000510579 951 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.41□□□□□ -1.86
H3F3CQ6NXT2 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms