Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF43Q68DV7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF43Q68DV7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF43Q68DV7 AL121839.2-201ENST00000565058 6943 ntBASIC5.91□□□□□ -1.46
RNF43Q68DV7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.91□□□□□ -1.46
RNF43Q68DV7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF43Q68DV7 MFSD8-239ENST00000641590 2479 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC239868.2-201ENST00000564237 4527 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF43Q68DV7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF43Q68DV7 RNA5SP131-201ENST00000365452 119 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 RNU6-1158P-201ENST00000391167 107 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF43Q68DV7 Y_RNA.618-201ENST00000410949 107 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC113412.1-201ENST00000425840 504 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL158073.1-201ENST00000426848 1104 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 HMGN2P27-201ENST00000427352 270 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC023347.2-201ENST00000433994 462 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 MTND1P9-201ENST00000453775 944 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 RN7SL283P-201ENST00000489055 303 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC105384.2-201ENST00000508433 640 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC104136.1-201ENST00000512969 394 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC105417.1-201ENST00000514691 285 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 RNU6-150P-201ENST00000516237 95 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 SNORA43.3-201ENST00000517240 103 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AP003122.3-201ENST00000526316 255 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 HAUS8P1-201ENST00000549005 542 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 HSPE1P2-201ENST00000554777 306 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 TPMTP1-201ENST00000592307 737 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL513327.3-201ENST00000602618 469 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AC115621.1-201ENST00000604653 858 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 AL627309.6-201ENST00000606857 840 ntBASIC5.9□□□□□ -1.46
RNF43Q68DV7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF43Q68DV7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF43Q68DV7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
RNF43Q68DV7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 SNORD116-29-201ENST00000384516 83 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 SNORD116-23-201ENST00000384645 92 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 RNU6-308P-201ENST00000390957 107 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 TMSB4XP8-201ENST00000402089 135 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL133270.1-201ENST00000402635 279 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC127391.1-201ENST00000411737 98 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 TMSB4XP6-201ENST00000415187 135 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 TMSB4XP1-201ENST00000424567 135 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 ATP5JP1-201ENST00000431631 322 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 H2AFZP6-201ENST00000444403 394 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 RNU6-329P-201ENST00000459618 107 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 RN7SL727P-201ENST00000482164 296 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 RPL32P33-201ENST00000487023 394 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC106872.3-201ENST00000495104 446 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC138409.2-202ENST00000507274 458 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 PCBP2P3-201ENST00000509726 843 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 RNU6-559P-201ENST00000516151 98 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 Y_RNA.718-201ENST00000517110 102 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 NRBF2P4-201ENST00000520874 850 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 MIR4660-201ENST00000583549 74 ntBASIC5.89□□□□□ -1.47
RNF43Q68DV7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF43Q68DV7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms