Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR143-201ENST00000385300 106 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AP003170.5-201ENST00000397185 335 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 MIR937-201ENST00000401271 86 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL391361.1-201ENST00000405580 489 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RNU2-20P-201ENST00000410425 191 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 OR6C66P-201ENST00000414917 930 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RAC1P3-201ENST00000416129 580 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RPS15AP12-201ENST00000419498 388 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AP000281.1-201ENST00000444036 316 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL139109.1-201ENST00000455491 297 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RPL23AP64-201ENST00000469465 435 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RN7SL326P-201ENST00000477493 296 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 CEACAMP10-202ENST00000495431 496 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 RNU4-77P-201ENST00000516692 156 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 HAUS8P1-201ENST00000549005 542 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC104662.1-201ENST00000604448 511 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL512329.2-201ENST00000607350 548 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC009229.3-201ENST00000608056 282 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL354718.1-201ENST00000619764 589 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 CR381572.1-201ENST00000625098 102 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC008013.2-202ENST00000637965 364 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC007159.1-201ENST00000566529 4706 ntBASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CTC1Q2NKJ3 SAGE3P-201ENST00000619800 1635 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AC004972.1-201ENST00000623934 2209 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 SNORD3E-201ENST00000362899 217 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 RNU6-48P-201ENST00000384161 107 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 RN7SKP286-201ENST00000410894 299 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 ARL5AP1-201ENST00000418991 388 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AL353752.1-201ENST00000454946 260 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 RPS29P15-201ENST00000458329 171 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 RPL35AP28-201ENST00000459730 331 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 HMGN1P9-201ENST00000515212 298 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 GAPDHP62-201ENST00000515313 990 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 IGKV2D-10-201ENST00000520194 281 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AC005332.4-201ENST00000592752 579 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 Z82243.1-201ENST00000609432 473 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 RN7SL787P-201ENST00000613000 284 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 U6.104-201ENST00000637979 90 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 HSPD1P8-201ENST00000400121 1658 ntBASIC6.68□□□□□ -1.34
CTC1Q2NKJ3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.64-201ENST00000362845 102 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 RNY4P16-201ENST00000364768 94 ntBASIC6.67□□□□□ -1.34
CTC1Q2NKJ3 Y_RNA.367-201ENST00000365544 101 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms